Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
---|---|
Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is yeaC [H]
Identifier: 170024328
GI number: 170024328
Start: 2323904
End: 2324278
Strand: Reverse
Name: yeaC [H]
Synonym: YPK_2094
Alternate gene names: 170024328
Gene position: 2324278-2323904 (Counterclockwise)
Preceding gene: 170024329
Following gene: 170024324
Centisome position: 49.56
GC content: 44.53
Gene sequence:
>375_bases ATGACCAAAATGGTGAGCAAACTGCAGGCTGAAGAGAAACATCGCAATTACATCTATGAAGAATCGATTCAGCTTATTAT TCGTTTATCCGAGGATGCTCTGATGGAGCTTGAAGACCTGATTTCAGTAATGACCCCCGAAATATACCAGCGTTTAGTGC AAGCCGTTGAACTGGGGAAGTGGCCAGATGGTGTGGCGCTGACATCTGAGCAGAAGGAAAATAGTCTGCAAATGGTTATG CTGTGGCAGGCCCGCCATAACCGTGATGCTCAACATATGAGTATTGGCACAGATGGTCAGATAGTGATGAAAACCAAACA AGAGCTGAAACAGCAGTTCAGTCAGTCAACGTTGGTTAAGTTGAAACCAGAATAA
Upstream 100 bases:
>100_bases TGTGGTAATTGTGATGCCCATTTGGGGCATGTATTCCCCGACGGACCGCAGCCTACGGGTGAACGTTATTGCATAAATTC GGCGTCACTGAATTTCGTTG
Downstream 100 bases:
>100_bases TCGCTAAGGTACGCAAAATTGAGTTGCGTATCCTCACATAATCAATATCCTCCGGCATTGCTGCCTGGCAGAGGGTTTTC TGAATACAAAAAATGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTKMVSKLQAEEKHRNYIYEESIQLIIRLSEDALMELEDLISVMTPEIYQRLVQAVELGKWPDGVALTSEQKENSLQMVM LWQARHNRDAQHMSIGTDGQIVMKTKQELKQQFSQSTLVKLKPE
Sequences:
>Translated_124_residues MTKMVSKLQAEEKHRNYIYEESIQLIIRLSEDALMELEDLISVMTPEIYQRLVQAVELGKWPDGVALTSEQKENSLQMVM LWQARHNRDAQHMSIGTDGQIVMKTKQELKQQFSQSTLVKLKPE >Mature_123_residues TKMVSKLQAEEKHRNYIYEESIQLIIRLSEDALMELEDLISVMTPEIYQRLVQAVELGKWPDGVALTSEQKENSLQMVML WQARHNRDAQHMSIGTDGQIVMKTKQELKQQFSQSTLVKLKPE
Specific function: Unknown
COG id: COG3139
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081972, Length=83, Percent_Identity=69.8795180722892, Blast_Score=127, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009749 [H]
Pfam domain/function: PF07023 DUF1315 [H]
EC number: NA
Molecular weight: Translated: 14432; Mature: 14301
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKMVSKLQAEEKHRNYIYEESIQLIIRLSEDALMELEDLISVMTPEIYQRLVQAVELGK CCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC WPDGVALTSEQKENSLQMVMLWQARHNRDAQHMSIGTDGQIVMKTKQELKQQFSQSTLVK CCCCCEECCCCCCCCHHHEEEEEHHCCCCCCCEECCCCCEEEHHHHHHHHHHHCCCCEEE LKPE ECCC >Mature Secondary Structure TKMVSKLQAEEKHRNYIYEESIQLIIRLSEDALMELEDLISVMTPEIYQRLVQAVELGK CHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC WPDGVALTSEQKENSLQMVMLWQARHNRDAQHMSIGTDGQIVMKTKQELKQQFSQSTLVK CCCCCEECCCCCCCCHHHEEEEEHHCCCCCCCEECCCCCEEEHHHHHHHHHHHCCCCEEE LKPE ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]