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The map label for this gene is ydjA [H]

Identifier: 170024324

GI number: 170024324

Start: 2319411

End: 2319962

Strand: Reverse

Name: ydjA [H]

Synonym: YPK_2090

Alternate gene names: 170024324

Gene position: 2319962-2319411 (Counterclockwise)

Preceding gene: 170024328

Following gene: 170024323

Centisome position: 49.47

GC content: 50.91

Gene sequence:

>552_bases
ATGGATGCGTTGGAACTCTTACTTAACCGCCGCTCGGCGTCCCGTTTAACCGCTCCGGCCCCAGCCGGTGAGGTCTTGGA
CCATATTATTCACGCAGGTATGCGAGCTCCGGACCATGGTGCCTTGCAGCCATGGCGCTTTGTTCTGATTGAAAACGAAG
GGTTAGTGCGTTTTAGTCAATTGTTACAAAAAGCGGTTCAGCAAGATGGTGCTGATGAGGCGGTCTTAGAGAAAGCGAAG
CAGGCACCTTTTCGTGCTCCGCTGATTATTACGGTGATCGCCCATGTAACTGAGAATGCCAAAGTGCCTAATTGGGAACA
GGTTGTTTCTGCCGGCTGTGCGGTACAAGCCATGCAAATGGCTGCTTTGGCACAGGGGTTTAATGGTATTTGGCGCACCG
GTTCTTGGACCCACCACCCAGTTGTTCGTCAGGGGTTTGCGTGTCGTGAACAAGACGAAATAGTCGGCTTTTTGTATCTC
GGGACACCGCAATTAAAATCTGCAACTAAAATCATGCCTCCAGACCACAGCGCTTTTGTCCGCTATTTCTAA

Upstream 100 bases:

>100_bases
TTTAAATCATCGATAAGCCTAGCTGATAGGTCAACGCTGGCAACAAAACGTAAACTTATGCTACCGTGCTGAAAATGAAA
ATCGTTATCAGGAGATAATA

Downstream 100 bases:

>100_bases
GTCTTGCGCGTTTTTTCTTCACTCATGTTATGCAGCTTATGTTCTTTACGGGGAATAAGCTGCGTTTTAGCCTGCTTTGT
GACCAACCTATCTGCCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDALELLLNRRSASRLTAPAPAGEVLDHIIHAGMRAPDHGALQPWRFVLIENEGLVRFSQLLQKAVQQDGADEAVLEKAK
QAPFRAPLIITVIAHVTENAKVPNWEQVVSAGCAVQAMQMAALAQGFNGIWRTGSWTHHPVVRQGFACREQDEIVGFLYL
GTPQLKSATKIMPPDHSAFVRYF

Sequences:

>Translated_183_residues
MDALELLLNRRSASRLTAPAPAGEVLDHIIHAGMRAPDHGALQPWRFVLIENEGLVRFSQLLQKAVQQDGADEAVLEKAK
QAPFRAPLIITVIAHVTENAKVPNWEQVVSAGCAVQAMQMAALAQGFNGIWRTGSWTHHPVVRQGFACREQDEIVGFLYL
GTPQLKSATKIMPPDHSAFVRYF
>Mature_183_residues
MDALELLLNRRSASRLTAPAPAGEVLDHIIHAGMRAPDHGALQPWRFVLIENEGLVRFSQLLQKAVQQDGADEAVLEKAK
QAPFRAPLIITVIAHVTENAKVPNWEQVVSAGCAVQAMQMAALAQGFNGIWRTGSWTHHPVVRQGFACREQDEIVGFLYL
GTPQLKSATKIMPPDHSAFVRYF

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=183, Percent_Identity=65.0273224043716, Blast_Score=254, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20185; Mature: 20185

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALELLLNRRSASRLTAPAPAGEVLDHIIHAGMRAPDHGALQPWRFVLIENEGLVRFSQ
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHH
LLQKAVQQDGADEAVLEKAKQAPFRAPLIITVIAHVTENAKVPNWEQVVSAGCAVQAMQM
HHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AALAQGFNGIWRTGSWTHHPVVRQGFACREQDEIVGFLYLGTPQLKSATKIMPPDHSAFV
HHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHE
RYF
ECC
>Mature Secondary Structure
MDALELLLNRRSASRLTAPAPAGEVLDHIIHAGMRAPDHGALQPWRFVLIENEGLVRFSQ
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHH
LLQKAVQQDGADEAVLEKAKQAPFRAPLIITVIAHVTENAKVPNWEQVVSAGCAVQAMQM
HHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AALAQGFNGIWRTGSWTHHPVVRQGFACREQDEIVGFLYLGTPQLKSATKIMPPDHSAFV
HHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHE
RYF
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]