| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yfeH [H]
Identifier: 170024229
GI number: 170024229
Start: 2215897
End: 2216925
Strand: Reverse
Name: yfeH [H]
Synonym: YPK_1994
Alternate gene names: 170024229
Gene position: 2216925-2215897 (Counterclockwise)
Preceding gene: 170024230
Following gene: 170024225
Centisome position: 47.27
GC content: 47.72
Gene sequence:
>1029_bases ATGTCATGGTTACAACGCTTACAGATAGATAAGTTTTTGTTAGTGCTGATACTGGTGGTGATTATCGCCTCTATCTTCCC TTGTGAAGGGGAAACCAAAGTGTGGTTTGAAAGGCTGACGACCGCCGCCATTGCTTTGTTGTTCTTTATGCACGGTGCCA AGTTATCACGTGCGGCAATAATGACAGGGATGGGGCATTGGAAGCTGCATTTGGTGGTTTTTCTCAGTACGTTTGCACTA TTTCCCCTATTAGGGTTGGGGATGAATGTACTGGTGCCCAATGTGTTAACACCCACGCTATATTTAGGGTTTCTCTATCT TTGTGCTTTACCGGCAACGGTTCAGTCGGCGATTGCGTATACCTCAGTCGCCGGGGGGAATGTTGCGGCGGCTATCTGTA GTGCATCGGCATCCAGTATCCTCGGGGTTTTCCTGTCACCCATTTTAGTTGGCATGCTGATGCAGACACAGGGCGGTGAT ACCGACACCTTACATGCTATCGGCTCCATCATTATGCAATTAATGGTACCGTTTGTTGTGGGGCATCTATCGCGGCCACT GATAGCTAAATGGGTTGAACGGCACAAAAAACTGGTCAATATCACTGACCGGTCATCTATTTTGTTGGTGGTTTATGTGG CGTTCAGCGAAGCGGTCGTTCAAGGGATTTGGAGTCAAATCGACGGCTGGTCACTTTTGGCCATATCAGTTTGTTCAATG GTATTACTAACGGTGGTATTGGTGGTTAATACCCTGGCCGCTCGTTGGCTGGGCTTTAATACCGCTGATGAGATTACCAT CGTGTTCTGCGGTTCGAAGAAAAGTTTGGCGAACGGTATTCCGATGGCTAACGTGTTGTTTCCTGCCTCAGTCGTGGGGG TTATGGTATTGCCGCTAATGATATTCCATCAGATTCAATTGATGGTCTGTGCGGTACTGGCACAACACTACGCGAAGCGA ATGGCGAGAGAACAAGCTGAAAAAGGACTGGACGTAATGCCGACAGTAAATGACAGTAAAACTCAGTGA
Upstream 100 bases:
>100_bases AAACCATTGGTTTAAAGCAGAGCTATTGGTCTAAATAAGTACTTTTGATTAAAAAACACTATTGATTAAATAAATACATT GGGTTGAAGGAATACAGTGG
Downstream 100 bases:
>100_bases GCCGATGCTAACGGTAGATTGGCGGCAGGCTGTTGTTATTTTGATAAATAAAAGTTTGTTGATAAAAGTAGCCTGGCGAT AAAAAGGGCTTAGTGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSWLQRLQIDKFLLVLILVVIIASIFPCEGETKVWFERLTTAAIALLFFMHGAKLSRAAIMTGMGHWKLHLVVFLSTFAL FPLLGLGMNVLVPNVLTPTLYLGFLYLCALPATVQSAIAYTSVAGGNVAAAICSASASSILGVFLSPILVGMLMQTQGGD TDTLHAIGSIIMQLMVPFVVGHLSRPLIAKWVERHKKLVNITDRSSILLVVYVAFSEAVVQGIWSQIDGWSLLAISVCSM VLLTVVLVVNTLAARWLGFNTADEITIVFCGSKKSLANGIPMANVLFPASVVGVMVLPLMIFHQIQLMVCAVLAQHYAKR MAREQAEKGLDVMPTVNDSKTQ
Sequences:
>Translated_342_residues MSWLQRLQIDKFLLVLILVVIIASIFPCEGETKVWFERLTTAAIALLFFMHGAKLSRAAIMTGMGHWKLHLVVFLSTFAL FPLLGLGMNVLVPNVLTPTLYLGFLYLCALPATVQSAIAYTSVAGGNVAAAICSASASSILGVFLSPILVGMLMQTQGGD TDTLHAIGSIIMQLMVPFVVGHLSRPLIAKWVERHKKLVNITDRSSILLVVYVAFSEAVVQGIWSQIDGWSLLAISVCSM VLLTVVLVVNTLAARWLGFNTADEITIVFCGSKKSLANGIPMANVLFPASVVGVMVLPLMIFHQIQLMVCAVLAQHYAKR MAREQAEKGLDVMPTVNDSKTQ >Mature_341_residues SWLQRLQIDKFLLVLILVVIIASIFPCEGETKVWFERLTTAAIALLFFMHGAKLSRAAIMTGMGHWKLHLVVFLSTFALF PLLGLGMNVLVPNVLTPTLYLGFLYLCALPATVQSAIAYTSVAGGNVAAAICSASASSILGVFLSPILVGMLMQTQGGDT DTLHAIGSIIMQLMVPFVVGHLSRPLIAKWVERHKKLVNITDRSSILLVVYVAFSEAVVQGIWSQIDGWSLLAISVCSMV LLTVVLVVNTLAARWLGFNTADEITIVFCGSKKSLANGIPMANVLFPASVVGVMVLPLMIFHQIQLMVCAVLAQHYAKRM AREQAEKGLDVMPTVNDSKTQ
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71725371, Length=348, Percent_Identity=28.1609195402299, Blast_Score=113, Evalue=2e-25, Organism=Escherichia coli, GI1788749, Length=320, Percent_Identity=65, Blast_Score=382, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6323677, Length=369, Percent_Identity=19.5121951219512, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016833 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37085; Mature: 36954
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLQRLQIDKFLLVLILVVIIASIFPCEGETKVWFERLTTAAIALLFFMHGAKLSRAAI CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH MTGMGHWKLHLVVFLSTFALFPLLGLGMNVLVPNVLTPTLYLGFLYLCALPATVQSAIAY HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSVAGGNVAAAICSASASSILGVFLSPILVGMLMQTQGGDTDTLHAIGSIIMQLMVPFVV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GHLSRPLIAKWVERHKKLVNITDRSSILLVVYVAFSEAVVQGIWSQIDGWSLLAISVCSM HHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLLTVVLVVNTLAARWLGFNTADEITIVFCGSKKSLANGIPMANVLFPASVVGVMVLPLM HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHH IFHQIQLMVCAVLAQHYAKRMAREQAEKGLDVMPTVNDSKTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SWLQRLQIDKFLLVLILVVIIASIFPCEGETKVWFERLTTAAIALLFFMHGAKLSRAAI CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH MTGMGHWKLHLVVFLSTFALFPLLGLGMNVLVPNVLTPTLYLGFLYLCALPATVQSAIAY HHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSVAGGNVAAAICSASASSILGVFLSPILVGMLMQTQGGDTDTLHAIGSIIMQLMVPFVV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GHLSRPLIAKWVERHKKLVNITDRSSILLVVYVAFSEAVVQGIWSQIDGWSLLAISVCSM HHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLLTVVLVVNTLAARWLGFNTADEITIVFCGSKKSLANGIPMANVLFPASVVGVMVLPLM HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHH IFHQIQLMVCAVLAQHYAKRMAREQAEKGLDVMPTVNDSKTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 7984428 [H]