| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170024171
Identifier: 170024171
GI number: 170024171
Start: 2141692
End: 2141814
Strand: Reverse
Name: 170024171
Synonym: YPK_1932
Alternate gene names: NA
Gene position: 2141814-2141692 (Counterclockwise)
Preceding gene: 170024172
Following gene: 170024168
Centisome position: 45.67
GC content: 42.28
Gene sequence:
>123_bases ATGGATGTATTTACGGCGTCTTTACGATCTGCCTGTTCTCTCCGTCGCGGGCACTTTGTCAATAACCTCAAAGGAGCCAA AGCTCCTTTTTATAAGGTGACTGAATTCTATTATTTAACCTGA
Upstream 100 bases:
>100_bases CTTTCAGACTGCTGACAAACCCCGATGACGCGATCTTGAACGGTGAGGATAGGCAGAGGAGTAAAGCGTCCGCGCCAAGG ATGGCGCGGCTCGAGCCTAC
Downstream 100 bases:
>100_bases ACACCTTCTACTGACAGGATCAATTCGACTTCTTGAGAAGCTGGTCCTAAATCTGTCGTAATATTGAAATCTTTCAACTT GATGTTACCGTTGGCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 40
Protein sequence:
>40_residues MDVFTASLRSACSLRRGHFVNNLKGAKAPFYKVTEFYYLT
Sequences:
>Translated_40_residues MDVFTASLRSACSLRRGHFVNNLKGAKAPFYKVTEFYYLT >Mature_40_residues MDVFTASLRSACSLRRGHFVNNLKGAKAPFYKVTEFYYLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4603; Mature: 4603
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVFTASLRSACSLRRGHFVNNLKGAKAPFYKVTEFYYLT CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MDVFTASLRSACSLRRGHFVNNLKGAKAPFYKVTEFYYLT CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA