| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024172
Identifier: 170024172
GI number: 170024172
Start: 2146338
End: 2147837
Strand: Reverse
Name: 170024172
Synonym: YPK_1935
Alternate gene names: NA
Gene position: 2147837-2146338 (Counterclockwise)
Preceding gene: 170024173
Following gene: 170024171
Centisome position: 45.8
GC content: 47.27
Gene sequence:
>1500_bases ATGACAACCGCTTATAACCATCTGTGTACTGCCTTTACACGCCTTTCCCGCTTTGAACATTTGTCCGCTATTGCGGGTTG GGATATGCAGACAATGATGCCCGCGAAAGGAAATCTTGCTCGCTCAGAAGCCATGGCCGAGCTTAATGTATTGCAGCATC AGATTCTGACCGCCCCACAGATAGGTGAATGGTTGAAACAAGCGGAACAAGAATTGCTTGATGAACAATCGATTGATGAA CTAAAACTGGCTAATTTGCGTGAAATGCATCGGCACTACCACAATGCGGTTTTATTACCGGAAAGTTTAGTAGAGGCCAA ATCATTGGCGGGTGCCCGCTGTGAACATGCCTGGCGCCAACAACGCATTGCGAACGATTGGGCTGGTTTTGCAGAAAATC TACGTGAAGTTGTCAAACTAAGCCGCGAAGAAGCCAAAATACGCGCTGAGGCGGCAGGTACATCAGGCTACGATGCATTA TTGAATTTATACGAACCCGGTACTAACAGCGCTGATATTGATCGTATTTTTGGTGATCTTAAGCAATGGCTCCCCGCATT ATTACAGAAGGTGACAACTAAACAACAAAGCAGTGAACCATGCCTGATCCCACAGGGGCCGTTCGATTTAGAAAAACAGC GGCAGTTGGGGCTAAGTGTGATGAAGGTCCTTGGTTTTGACTTCAATGGCGGACGAGTAGATGTCAGTGTGCACCCATTC TGCGGTGGCGTTCCTCAAGATGTCCGTATCACGACTCGCTATAATGATCAGGAATTTCTCAGTGCTTTAATGGGCATCGT GCATGAAACTGGCCACGCCCGTTATGAACAGAATTTACCGCGTGAATGGTTGGGGCAACCCATCGCACATGCCCGTTCTA CAGCAATCCATGAATCTCAAAGTCTGCTGTTTGAAATGCAATTAGCCCGCAGTAATGAGTTCCTGCAAGTGATCCACCCA CTGGTCATACAACAATTTGGTGAGCAGCCAGCTTTTGCAGAACATAACTTCATCGCACTTAATCAACGGGTTAAAACAGG CCTTATTCGCGTTGATGCAGATGAAGTCAGCTACCCTGCTCATGTCATTTTGCGCTACGAAATAGAGAAAGCACTCATTG GCGGTGAGATTGAAGTAGAGGATATCCCGGCACTCTGGAATGAAAAAATGCAACAGTATTTGGGGATCAATACAGAGGGA GATTATCGTAACGGTTGTATGCAAGATATTCATTGGACGGATGGGGCTTTTGGTTATTTCCCAACATATACATTGGGTGC TATGTATGCGGCTCAGTTATTCCATGCTGCGCGAAGCGCAATTCCGGCGTTAGATTCTCACATTGCTAACGGTAACCTCG CCCCCCTACTCAACTGGTTACAACAGAATATATGGCAGCACGGTAGCCGTTACCCGACAGCTGAACTGATCACAAAAGCG ACGGGTGAGCCCCTTAACCCCCGATATTTCCGCCAGCATTTAGAACGCCGTTATCTCTGA
Upstream 100 bases:
>100_bases CTCTATCCGCTGATCAGAATTAATGCGCGAACAGAACTAATTCTTCGCGAACTTACTATTTCGTGCACTTGCTATTTCGC GAACCACTATGGAGTGATTT
Downstream 100 bases:
>100_bases TTTTTAATTCGGAATAAGCCTGACGCAATCAAGCTTGTCAGGCTTATTTATACCTGTCGTCGTGCTATCCATCGAACCTC ACGCTTCATGTATTAGCTGT
Product: carboxypeptidase Taq
Products: NA
Alternate protein names: Carboxypeptidase Taq [H]
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MTTAYNHLCTAFTRLSRFEHLSAIAGWDMQTMMPAKGNLARSEAMAELNVLQHQILTAPQIGEWLKQAEQELLDEQSIDE LKLANLREMHRHYHNAVLLPESLVEAKSLAGARCEHAWRQQRIANDWAGFAENLREVVKLSREEAKIRAEAAGTSGYDAL LNLYEPGTNSADIDRIFGDLKQWLPALLQKVTTKQQSSEPCLIPQGPFDLEKQRQLGLSVMKVLGFDFNGGRVDVSVHPF CGGVPQDVRITTRYNDQEFLSALMGIVHETGHARYEQNLPREWLGQPIAHARSTAIHESQSLLFEMQLARSNEFLQVIHP LVIQQFGEQPAFAEHNFIALNQRVKTGLIRVDADEVSYPAHVILRYEIEKALIGGEIEVEDIPALWNEKMQQYLGINTEG DYRNGCMQDIHWTDGAFGYFPTYTLGAMYAAQLFHAARSAIPALDSHIANGNLAPLLNWLQQNIWQHGSRYPTAELITKA TGEPLNPRYFRQHLERRYL
Sequences:
>Translated_499_residues MTTAYNHLCTAFTRLSRFEHLSAIAGWDMQTMMPAKGNLARSEAMAELNVLQHQILTAPQIGEWLKQAEQELLDEQSIDE LKLANLREMHRHYHNAVLLPESLVEAKSLAGARCEHAWRQQRIANDWAGFAENLREVVKLSREEAKIRAEAAGTSGYDAL LNLYEPGTNSADIDRIFGDLKQWLPALLQKVTTKQQSSEPCLIPQGPFDLEKQRQLGLSVMKVLGFDFNGGRVDVSVHPF CGGVPQDVRITTRYNDQEFLSALMGIVHETGHARYEQNLPREWLGQPIAHARSTAIHESQSLLFEMQLARSNEFLQVIHP LVIQQFGEQPAFAEHNFIALNQRVKTGLIRVDADEVSYPAHVILRYEIEKALIGGEIEVEDIPALWNEKMQQYLGINTEG DYRNGCMQDIHWTDGAFGYFPTYTLGAMYAAQLFHAARSAIPALDSHIANGNLAPLLNWLQQNIWQHGSRYPTAELITKA TGEPLNPRYFRQHLERRYL >Mature_498_residues TTAYNHLCTAFTRLSRFEHLSAIAGWDMQTMMPAKGNLARSEAMAELNVLQHQILTAPQIGEWLKQAEQELLDEQSIDEL KLANLREMHRHYHNAVLLPESLVEAKSLAGARCEHAWRQQRIANDWAGFAENLREVVKLSREEAKIRAEAAGTSGYDALL NLYEPGTNSADIDRIFGDLKQWLPALLQKVTTKQQSSEPCLIPQGPFDLEKQRQLGLSVMKVLGFDFNGGRVDVSVHPFC GGVPQDVRITTRYNDQEFLSALMGIVHETGHARYEQNLPREWLGQPIAHARSTAIHESQSLLFEMQLARSNEFLQVIHPL VIQQFGEQPAFAEHNFIALNQRVKTGLIRVDADEVSYPAHVILRYEIEKALIGGEIEVEDIPALWNEKMQQYLGINTEGD YRNGCMQDIHWTDGAFGYFPTYTLGAMYAAQLFHAARSAIPALDSHIANGNLAPLLNWLQQNIWQHGSRYPTAELITKAT GEPLNPRYFRQHLERRYL
Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: =3.4.17.19 [H]
Molecular weight: Translated: 56585; Mature: 56454
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAYNHLCTAFTRLSRFEHLSAIAGWDMQTMMPAKGNLARSEAMAELNVLQHQILTAPQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH IGEWLKQAEQELLDEQSIDELKLANLREMHRHYHNAVLLPESLVEAKSLAGARCEHAWRQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHCCHHHHHHHHH QRIANDWAGFAENLREVVKLSREEAKIRAEAAGTSGYDALLNLYEPGTNSADIDRIFGDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHH KQWLPALLQKVTTKQQSSEPCLIPQGPFDLEKQRQLGLSVMKVLGFDFNGGRVDVSVHPF HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC CGGVPQDVRITTRYNDQEFLSALMGIVHETGHARYEQNLPREWLGQPIAHARSTAIHESQ CCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCHHHHHHHHHHHHHH SLLFEMQLARSNEFLQVIHPLVIQQFGEQPAFAEHNFIALNQRVKTGLIRVDADEVSYPA HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCEEEECHHHHCCCC HVILRYEIEKALIGGEIEVEDIPALWNEKMQQYLGINTEGDYRNGCMQDIHWTDGAFGYF CEEEEEEHHHHHHCCCEEEHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PTYTLGAMYAAQLFHAARSAIPALDSHIANGNLAPLLNWLQQNIWQHGSRYPTAELITKA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH TGEPLNPRYFRQHLERRYL CCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TTAYNHLCTAFTRLSRFEHLSAIAGWDMQTMMPAKGNLARSEAMAELNVLQHQILTAPQ CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH IGEWLKQAEQELLDEQSIDELKLANLREMHRHYHNAVLLPESLVEAKSLAGARCEHAWRQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHCCHHHHHHHHH QRIANDWAGFAENLREVVKLSREEAKIRAEAAGTSGYDALLNLYEPGTNSADIDRIFGDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHH KQWLPALLQKVTTKQQSSEPCLIPQGPFDLEKQRQLGLSVMKVLGFDFNGGRVDVSVHPF HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC CGGVPQDVRITTRYNDQEFLSALMGIVHETGHARYEQNLPREWLGQPIAHARSTAIHESQ CCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCHHHHHHHHHHHHHH SLLFEMQLARSNEFLQVIHPLVIQQFGEQPAFAEHNFIALNQRVKTGLIRVDADEVSYPA HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCEEEECHHHHCCCC HVILRYEIEKALIGGEIEVEDIPALWNEKMQQYLGINTEGDYRNGCMQDIHWTDGAFGYF CEEEEEEHHHHHHCCCEEEHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PTYTLGAMYAAQLFHAARSAIPALDSHIANGNLAPLLNWLQQNIWQHGSRYPTAELITKA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH TGEPLNPRYFRQHLERRYL CCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765282; 1369078 [H]