| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024140
Identifier: 170024140
GI number: 170024140
Start: 2106592
End: 2107038
Strand: Reverse
Name: 170024140
Synonym: YPK_1901
Alternate gene names: NA
Gene position: 2107038-2106592 (Counterclockwise)
Preceding gene: 170024142
Following gene: 170024139
Centisome position: 44.93
GC content: 51.23
Gene sequence:
>447_bases ATGAGAGCGTACCGCCCAAACCCCGCGACTAAAATGGGAACGCTTTGGCGTGAAATTGGCTTACCCGCCAGCCGCGGCAC GATATTGGTCGATAGTATCAAAATGGGGTTTTCTGTTGATGTTATCGACAGCATTCATTTATGGGCATCCATGCCTAAAG CTGAAATATTACGTGCTACCGGTATCCCCAGCCGTAGCCTGACTCGCCGCCGCACACATGATGGCCGTTTTACGCCTGAA GAAAGCGAGAGAATCGCACGTTTTGTCCGCGTAATGGATGCCGCTGTCGATTTGTTCGGCGGCGATAAAGGTAAAGCCAT TACCTGGATGTCCACGCCCATCAAAGGATTGGGGTACCGCAGCCCAGATTCCTTACTGGAAACCGAAACTGGCGCACTGG AAGTGTGTGATTTGATTGGTCGTTTGGAACACGGCGTCTTTACTTAA
Upstream 100 bases:
>100_bases AGCTTCGCCGTCAAGATTGGGTGACACTTTGCATTACTTCAGCCAATTGGCTATAGTAAATGTAGCCAATTGACCGAGGA AGTTACATGGAGGAGGTTAC
Downstream 100 bases:
>100_bases CGGCTTAAGCCGCCCGATGGAACGAAACTTATGATGCTATCCCTATGACGCTATTATCCCTATGACGCTATACCGCATTG TTATGCGCCGCTATCTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MRAYRPNPATKMGTLWREIGLPASRGTILVDSIKMGFSVDVIDSIHLWASMPKAEILRATGIPSRSLTRRRTHDGRFTPE ESERIARFVRVMDAAVDLFGGDKGKAITWMSTPIKGLGYRSPDSLLETETGALEVCDLIGRLEHGVFT
Sequences:
>Translated_148_residues MRAYRPNPATKMGTLWREIGLPASRGTILVDSIKMGFSVDVIDSIHLWASMPKAEILRATGIPSRSLTRRRTHDGRFTPE ESERIARFVRVMDAAVDLFGGDKGKAITWMSTPIKGLGYRSPDSLLETETGALEVCDLIGRLEHGVFT >Mature_148_residues MRAYRPNPATKMGTLWREIGLPASRGTILVDSIKMGFSVDVIDSIHLWASMPKAEILRATGIPSRSLTRRRTHDGRFTPE ESERIARFVRVMDAAVDLFGGDKGKAITWMSTPIKGLGYRSPDSLLETETGALEVCDLIGRLEHGVFT
Specific function: Unknown
COG id: COG5642
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16402; Mature: 16402
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAYRPNPATKMGTLWREIGLPASRGTILVDSIKMGFSVDVIDSIHLWASMPKAEILRAT CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCHHHHHHHC GIPSRSLTRRRTHDGRFTPEESERIARFVRVMDAAVDLFGGDKGKAITWMSTPIKGLGYR CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC SPDSLLETETGALEVCDLIGRLEHGVFT CCHHHHHCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRAYRPNPATKMGTLWREIGLPASRGTILVDSIKMGFSVDVIDSIHLWASMPKAEILRAT CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCHHHHHHHC GIPSRSLTRRRTHDGRFTPEESERIARFVRVMDAAVDLFGGDKGKAITWMSTPIKGLGYR CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC SPDSLLETETGALEVCDLIGRLEHGVFT CCHHHHHCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA