| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023878
Identifier: 170023878
GI number: 170023878
Start: 1814636
End: 1815691
Strand: Direct
Name: 170023878
Synonym: YPK_1637
Alternate gene names: NA
Gene position: 1814636-1815691 (Clockwise)
Preceding gene: 170023877
Following gene: 170023879
Centisome position: 38.7
GC content: 51.99
Gene sequence:
>1056_bases ATGATTAGGTATTCCGGCAATCCGTTAATCACACCCCAGGATATTACGCCAAGCCATCCGGGATTTAAGGTTGAATGCGC CTTTAATGCGGGCATTACCAAACTGGGCGATGAGACGATTATGTTGATTCGTATCGCGGAGAGCGTTATCCCTGAAAGTG AGGGTATTACCGTCGTGCCTTTGCTTATGGAAATTTCCGGGCACTGGCAGGTGACCACGCGGGTATTTAAGCACGATGAC CCCGCCTACGATTTTAGTGATCCTCGGCTGATCAGCGATATCGCCGATCCATCGACCGTGTACCTGACATCGCTCTCCCA TCTTCGTGTGGCAAGAAGCCATGATGGCGTTACTTTCGTCGTTGACGATCAACCCTTTATCTTCCCGGCCAACGGTGATG AAGCGTTTGGTTGTGAGGATGCTCGCATTACTCAGATCGACGGCGCTTACTATATTAACTATTCCGCAGTGTCAGCAAAG GGCATTTGCACCGCGCTGGCGGTTACCCAGGATTTCACCGACGTTAAGCGTTTGGGGCTGATTTTCTGCCCTGATAATCG CGATGCGTGTCTGTTCCCGGAAAAAATCAACGGTAAATATATGACGTTGCACCGCCCGGCACCTAAACACTTCGGTAAAC CCGAGATTTGGCTGGCCAGCTCTCTGGATTTGCTGCATTGGGGAGATCATCGGCATTTACTGGGGACATCGCAAGACCCT TGGGATGCCTTGAAACTGGGGGGCGGGGCGCAAATGCTGAAAACAGAAAAAGGGTGGCTGCAAATTTACCATGGGGTAGA TGCGACCCAACGCTATTCTCTCGGTGCGCTGCTGCTAGACCTGGAACAGCCTACTAAAATCCTTGCTAAATCGCCGGTAC CGTTGCTTCAACCGCAGGCTCCTTATGAGCTGCACGGCTTTTTTGGTAACGTCGTCTTTACCTGCGGCGCACTCATTGAG AACGATAGCCTACGGGTCTATTACGGTGCGGCGGATGAATGTATGTGCCTGGCTGAAATGCCGCTGGCTCAACTGTGGCA GCACCTGTCGGTGTAA
Upstream 100 bases:
>100_bases TATTTGATACTCGAAATTATTTGATAATCGAAAGTATTTGATACTCGAAAACGCGGTGAAATGACTCACCACGATATTGC TATTTATATAGAGGACCATA
Downstream 100 bases:
>100_bases TTACGGGATAAAAAAATAAGGCTTCTATGATGAGACATGCCCCACCAGCCAGCGTTGCCCAATTGTTCGCCGATTACCAA AAACGGACGGCTCACAACAC
Product: glycosidase PH1107-related
Products: NA
Alternate protein names: Glycosidase Related Protein; Glycosylase; Glycosidase-Like Protein; Conserved Domain Protein; Glycosidase-Related; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MIRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVPLLMEISGHWQVTTRVFKHDD PAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFVVDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAK GICTALAVTQDFTDVKRLGLIFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDP WDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQAPYELHGFFGNVVFTCGALIE NDSLRVYYGAADECMCLAEMPLAQLWQHLSV
Sequences:
>Translated_351_residues MIRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVPLLMEISGHWQVTTRVFKHDD PAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFVVDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAK GICTALAVTQDFTDVKRLGLIFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDP WDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQAPYELHGFFGNVVFTCGALIE NDSLRVYYGAADECMCLAEMPLAQLWQHLSV >Mature_351_residues MIRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVPLLMEISGHWQVTTRVFKHDD PAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFVVDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAK GICTALAVTQDFTDVKRLGLIFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDP WDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQAPYELHGFFGNVVFTCGALIE NDSLRVYYGAADECMCLAEMPLAQLWQHLSV
Specific function: Unknown
COG id: COG2152
COG function: function code G; Predicted glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38887; Mature: 38887
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVP CEEECCCEEECCCCCCCCCCCEEEEEEECCCCEECCCCEEEEEEEEHHHCCCCCCCEEEE LLMEISGHWQVTTRVFKHDDPAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFV EEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEEHHHHEEEECCCCEEEE VDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAKGICTALAVTQDFTDVKRLGL ECCCCEEEECCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCEEEEEECCCHHHHHHCEE IFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDP EEECCCCCCEECHHCCCCEEEEEECCCHHHCCCCCEEEECCCCEEEECCCCEECCCCCCC WDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQA HHHHEECCCHHEEECCCCEEEEEECCCCCHHEECCEEEEECCCCHHHHHCCCCCCCCCCC PYELHGFFGNVVFTCGALIENDSLRVYYGAADECMCLAEMPLAQLWQHLSV CCEEHHHHHHHHHEEHHEEECCCEEEEECCCCCEEEECCCCHHHHHHHHCC >Mature Secondary Structure MIRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVP CEEECCCEEECCCCCCCCCCCEEEEEEECCCCEECCCCEEEEEEEEHHHCCCCCCCEEEE LLMEISGHWQVTTRVFKHDDPAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFV EEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEEHHHHEEEECCCCEEEE VDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAKGICTALAVTQDFTDVKRLGL ECCCCEEEECCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCEEEEEECCCHHHHHHCEE IFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDP EEECCCCCCEECHHCCCCEEEEEECCCHHHCCCCCEEEECCCCEEEECCCCEECCCCCCC WDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQA HHHHEECCCHHEEECCCCEEEEEECCCCCHHEECCEEEEECCCCHHHHHCCCCCCCCCCC PYELHGFFGNVVFTCGALIENDSLRVYYGAADECMCLAEMPLAQLWQHLSV CCEEHHHHHHHHHEEHHEEECCCEEEEECCCCCEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA