| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023879
Identifier: 170023879
GI number: 170023879
Start: 1815718
End: 1816656
Strand: Direct
Name: 170023879
Synonym: YPK_1638
Alternate gene names: NA
Gene position: 1815718-1816656 (Clockwise)
Preceding gene: 170023878
Following gene: 170023880
Centisome position: 38.72
GC content: 49.2
Gene sequence:
>939_bases ATGATGAGACATGCCCCACCAGCCAGCGTTGCCCAATTGTTCGCCGATTACCAAAAACGGACGGCTCACAACACCTTTTC CACCGGTCGGCTCGAATTCACGGGGGTCGGTGACAAGGATGTTTATAACATCACCGCGCCATTTACCTCTGCCGGGCAGG TTGTGATCGCCGGACGTGTTGAAGCGAGAGACTCCGAGCATTCGACTATTGTGTTTTTCCGTGAACAGCAAGGGCAATGG GCACCAGTTGAAAACGCACCGACATTCCAATTACAGGATCCTTTTTTCACCTGGATTGAGGATGAGCTTATTTTTGGCGG GGTTGAGATTAATCCACACCCTGATAACCCAGGGCAACTCATCTGGCACACCGTATTTTTCCGTGGGCGAGATATTCACT CATTAACGCGTTTCGCCTCCGGCCCACCGGGGATGAAAGATATCCGTTTGTGCCATATTCAGCAGGGGCGCATCGGAGTA TTTACCCGACCACAAGGTAAAATAGGCGGCAGAGGCACTATTGGGTATGTTGAAATAAACAACCTGGAGGCGCTAACGCC AGAAACTATCACCGGCGCCGAACTGTTCGAGCAGCAGTTTAATTCCGAAGAATGGGGCGGCGTCAACGAAACGCATTTAC TTTGCGATGGCACCATTGGGTTACTTTCCCATATTGCCTGTTTCGATCAACATGGAAGGAGACACTACTACCCGGGCGTA TTTATCTTTAACCCGGACACCAGAAACTATACGCCAATAAAAATTATTGCAGCCAGAGATAATTTTCTACCCGGTGCAGC TAAACGCCCGGACTTAGTGGATGTTATTTTTCCGGGTGGCTTAATTGTATTACCTAACAACGGCTGGCGATTATATGTTG GTGCCAGCGATGCGGAAGCGCACTGGATTGATATTGAAGATCCTTTTAGCGGATTTTAA
Upstream 100 bases:
>100_bases ACGGTGCGGCGGATGAATGTATGTGCCTGGCTGAAATGCCGCTGGCTCAACTGTGGCAGCACCTGTCGGTGTAATTACGG GATAAAAAAATAAGGCTTCT
Downstream 100 bases:
>100_bases TTACCAGGAAATCTGAATTGCGTTTTTAACTCGATTTATAGAAAAAACCTAATATCAATTAGATTGGGTGGAGTTCCCAT TATTTATCGATTGGGAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVIAGRVEARDSEHSTIVFFREQQGQW APVENAPTFQLQDPFFTWIEDELIFGGVEINPHPDNPGQLIWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGV FTRPQGKIGGRGTIGYVEINNLEALTPETITGAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGV FIFNPDTRNYTPIKIIAARDNFLPGAAKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEAHWIDIEDPFSGF
Sequences:
>Translated_312_residues MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVIAGRVEARDSEHSTIVFFREQQGQW APVENAPTFQLQDPFFTWIEDELIFGGVEINPHPDNPGQLIWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGV FTRPQGKIGGRGTIGYVEINNLEALTPETITGAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGV FIFNPDTRNYTPIKIIAARDNFLPGAAKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEAHWIDIEDPFSGF >Mature_312_residues MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVIAGRVEARDSEHSTIVFFREQQGQW APVENAPTFQLQDPFFTWIEDELIFGGVEINPHPDNPGQLIWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGV FTRPQGKIGGRGTIGYVEINNLEALTPETITGAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGV FIFNPDTRNYTPIKIIAARDNFLPGAAKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEAHWIDIEDPFSGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34836; Mature: 34836
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVIAGRV CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEE EARDSEHSTIVFFREQQGQWAPVENAPTFQLQDPFFTWIEDELIFGGVEINPHPDNPGQL ECCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCEEEEECEEECCCCCCCCCE IWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGVFTRPQGKIGGRGTIGYVEIN EEEEEEECCCCHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEEEC NLEALTPETITGAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGV CCEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEECCEE FIFNPDTRNYTPIKIIAARDNFLPGAAKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEA EEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCE HWIDIEDPFSGF EEEECCCCCCCC >Mature Secondary Structure MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVIAGRV CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEE EARDSEHSTIVFFREQQGQWAPVENAPTFQLQDPFFTWIEDELIFGGVEINPHPDNPGQL ECCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCEEEEECEEECCCCCCCCCE IWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGVFTRPQGKIGGRGTIGYVEIN EEEEEEECCCCHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEEEEEC NLEALTPETITGAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGV CCEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEECCEE FIFNPDTRNYTPIKIIAARDNFLPGAAKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEA EEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCE HWIDIEDPFSGF EEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA