| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023848
Identifier: 170023848
GI number: 170023848
Start: 1776605
End: 1777543
Strand: Direct
Name: 170023848
Synonym: YPK_1607
Alternate gene names: NA
Gene position: 1776605-1777543 (Clockwise)
Preceding gene: 170023847
Following gene: 170023849
Centisome position: 37.89
GC content: 46.33
Gene sequence:
>939_bases ATGACAACACTCAGTGAGCAAGCTCCTCCTCTACTGCAGGATACTCAGCTTGAACAGCAAATCTTGCGCCGCTCGATTTT TTATACCTTGATTATTGCAGTAATGGGGATCGTCTTCGGTATTGTATGTGGCTCAATGTCGATTATCTTTGATGGTATGT TCTCCGCCCTGGATGCGGGGATGTGCAGTTTATCTCTATTGGTATCTCGGCTACTTGGTCAACCGCATAGCCGACGTTTT CAATATGGTTTTTGGCATGTGGAACCGTTGGTTCTGGCCTTTAATGGCAGCTTATTAGCCCTCCTTTGTCTTTACGCTTT TGTGAATGCGATAAAAGGTATTTTTGATGGCGGGCGGGAATTGGAGCTCGGTTGGGCCATTGTCTACACATTGGCTGTCA GTATTTTTTGTTTCACCATTTATTTAAAACAGCGGCGCTTGAATAAACGGGTGAAATCCGAGCTTATTGCATTGGATACG AAGAGTTGGTTCATGTCCGCTTGTATCAGTACGGCGCTGTTAGTTGCATTTTTACTCTCATGGGGTATGGAAGGTACGCG CTATGAACACCTTATTGTTTATGCTGACCCCATGGTGCTGGCGCTGTTAACGTTAGTATTAATTCCGGTCCCAATTAAAA CAGTGATTGCGGCAGTGCGTGAAGTTTTACAAATGACGCCCGATACACTGGATACGGCGATTGAGACCTTGATGGAACGC CTGGTGGATAAATATAAATTTGTTGATTACTCGCATTATGCCACCCGTGCTGGCCGTGGTTTATTTATCGAGATCCACGT GGTGATCCCGCCAGAAATGGATACCCGCGGGGTTCATCATTTCGATACTATCCGCGATGAGATCGCCCATGAGATTGGTG AGTCTGGGCCTCACCGTTGGTTAACCATCTCCTTTACGCGTGATGCCAAGTGGTTGTAG
Upstream 100 bases:
>100_bases TTGGCATGTGATCTTATTAAATTGAGTTGATGTAATAATATTCCTAATATGAGAGTTTACTCATCAAGCTAAATTAAAAT CAAAAAAACAGGTTGTACAC
Downstream 100 bases:
>100_bases CTGGCCATAGCCATTTGGTTTTTTATCGTGTTTTTATCATCCCCCAGCCGTGATTTGCTGGGGGTTTTTAATGGTTACCA AGGTGGATAAGTGAAAATAA
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: Cation Efflux Protein; Co/Zn/Cd Cation Transporter; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux System Component; Cation Efflux Family Protein; Cation Transporter; Cation Transporter-Like Membrane Protein; Cation Efflux Transmembrane Protein; Cation Efflux Pump; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; Cation Efflux Transporter Protein; CDF Family Transporter
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTTLSEQAPPLLQDTQLEQQILRRSIFYTLIIAVMGIVFGIVCGSMSIIFDGMFSALDAGMCSLSLLVSRLLGQPHSRRF QYGFWHVEPLVLAFNGSLLALLCLYAFVNAIKGIFDGGRELELGWAIVYTLAVSIFCFTIYLKQRRLNKRVKSELIALDT KSWFMSACISTALLVAFLLSWGMEGTRYEHLIVYADPMVLALLTLVLIPVPIKTVIAAVREVLQMTPDTLDTAIETLMER LVDKYKFVDYSHYATRAGRGLFIEIHVVIPPEMDTRGVHHFDTIRDEIAHEIGESGPHRWLTISFTRDAKWL
Sequences:
>Translated_312_residues MTTLSEQAPPLLQDTQLEQQILRRSIFYTLIIAVMGIVFGIVCGSMSIIFDGMFSALDAGMCSLSLLVSRLLGQPHSRRF QYGFWHVEPLVLAFNGSLLALLCLYAFVNAIKGIFDGGRELELGWAIVYTLAVSIFCFTIYLKQRRLNKRVKSELIALDT KSWFMSACISTALLVAFLLSWGMEGTRYEHLIVYADPMVLALLTLVLIPVPIKTVIAAVREVLQMTPDTLDTAIETLMER LVDKYKFVDYSHYATRAGRGLFIEIHVVIPPEMDTRGVHHFDTIRDEIAHEIGESGPHRWLTISFTRDAKWL >Mature_311_residues TTLSEQAPPLLQDTQLEQQILRRSIFYTLIIAVMGIVFGIVCGSMSIIFDGMFSALDAGMCSLSLLVSRLLGQPHSRRFQ YGFWHVEPLVLAFNGSLLALLCLYAFVNAIKGIFDGGRELELGWAIVYTLAVSIFCFTIYLKQRRLNKRVKSELIALDTK SWFMSACISTALLVAFLLSWGMEGTRYEHLIVYADPMVLALLTLVLIPVPIKTVIAAVREVLQMTPDTLDTAIETLMERL VDKYKFVDYSHYATRAGRGLFIEIHVVIPPEMDTRGVHHFDTIRDEIAHEIGESGPHRWLTISFTRDAKWL
Specific function: Unknown
COG id: COG3965
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35265; Mature: 35134
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLSEQAPPLLQDTQLEQQILRRSIFYTLIIAVMGIVFGIVCGSMSIIFDGMFSALDAG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCSLSLLVSRLLGQPHSRRFQYGFWHVEPLVLAFNGSLLALLCLYAFVNAIKGIFDGGRE HHHHHHHHHHHHCCCCCCCEECCEEEHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCE LELGWAIVYTLAVSIFCFTIYLKQRRLNKRVKSELIALDTKSWFMSACISTALLVAFLLS EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH WGMEGTRYEHLIVYADPMVLALLTLVLIPVPIKTVIAAVREVLQMTPDTLDTAIETLMER CCCCCCCEEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LVDKYKFVDYSHYATRAGRGLFIEIHVVIPPEMDTRGVHHFDTIRDEIAHEIGESGPHRW HHHHHHHCCHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE LTISFTRDAKWL EEEEECCCCCCC >Mature Secondary Structure TTLSEQAPPLLQDTQLEQQILRRSIFYTLIIAVMGIVFGIVCGSMSIIFDGMFSALDAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCSLSLLVSRLLGQPHSRRFQYGFWHVEPLVLAFNGSLLALLCLYAFVNAIKGIFDGGRE HHHHHHHHHHHHCCCCCCCEECCEEEHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCE LELGWAIVYTLAVSIFCFTIYLKQRRLNKRVKSELIALDTKSWFMSACISTALLVAFLLS EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH WGMEGTRYEHLIVYADPMVLALLTLVLIPVPIKTVIAAVREVLQMTPDTLDTAIETLMER CCCCCCCEEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LVDKYKFVDYSHYATRAGRGLFIEIHVVIPPEMDTRGVHHFDTIRDEIAHEIGESGPHRW HHHHHHHCCHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE LTISFTRDAKWL EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA