| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023849
Identifier: 170023849
GI number: 170023849
Start: 1777781
End: 1778323
Strand: Direct
Name: 170023849
Synonym: YPK_1608
Alternate gene names: NA
Gene position: 1777781-1778323 (Clockwise)
Preceding gene: 170023848
Following gene: 170023850
Centisome position: 37.91
GC content: 39.04
Gene sequence:
>543_bases ATGCCAGGTCGTATTCAAGAAATACCTCAATCATGGCTTACCGCTAGCCGGCCCGTTACAGAAATTGTAAAGCAACCATC AACGGGTTTAGTAAAAGACAGTAGTCTTAATAAAGACATAAAAACCGCAGAGACACAGAAATTTCTGGAAGAGACAGACG CTCAGATGAAAGTTATTTGCGCCTGGGAAATGGACAGTACCACTGTGGACCAATGTATTAAAGAGTTATGCGATAAAATA GGGGCATTGTATAACGATGTATTAACTACTCGAAGCCAGGTCTATGAAATGGTTTTAAATTACGGGACAGAAAGTGGTCA AATGGTGCGCTTAAGAGAAGGATGTAACGCAGCCGATAGAGACCGCTATTTAGAAAAATTGATCGCTTACAATCATATTC GTCAGGCTGTTAGTGATAAAGTCGCGAAGATAGAAAAACATACGGACTCAGTAAAACGAATGGTTGATTTACATCATTAT GATTATATTTGTGGTGACTTAAAGGCACTAAATAAAAATGGTGACGTACCTAAACAGTCATGA
Upstream 100 bases:
>100_bases ATAAAAGAATATCCCCTAAAAATAATTAATACTCCTTATCAACATTGAGCGTCCTTATTTTTCACCCAATAAGGGCTTAA CCACCACAAGGAGTTATTCT
Downstream 100 bases:
>100_bases TTCAGATTAGATAATTTACTTATCGTAAATAACTGGATTTTTATCTTTAATTATACACTGCATTTACAGGTTGTTTCTTT AGTAATCAGACTGTTACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPGRIQEIPQSWLTASRPVTEIVKQPSTGLVKDSSLNKDIKTAETQKFLEETDAQMKVICAWEMDSTTVDQCIKELCDKI GALYNDVLTTRSQVYEMVLNYGTESGQMVRLREGCNAADRDRYLEKLIAYNHIRQAVSDKVAKIEKHTDSVKRMVDLHHY DYICGDLKALNKNGDVPKQS
Sequences:
>Translated_180_residues MPGRIQEIPQSWLTASRPVTEIVKQPSTGLVKDSSLNKDIKTAETQKFLEETDAQMKVICAWEMDSTTVDQCIKELCDKI GALYNDVLTTRSQVYEMVLNYGTESGQMVRLREGCNAADRDRYLEKLIAYNHIRQAVSDKVAKIEKHTDSVKRMVDLHHY DYICGDLKALNKNGDVPKQS >Mature_179_residues PGRIQEIPQSWLTASRPVTEIVKQPSTGLVKDSSLNKDIKTAETQKFLEETDAQMKVICAWEMDSTTVDQCIKELCDKIG ALYNDVLTTRSQVYEMVLNYGTESGQMVRLREGCNAADRDRYLEKLIAYNHIRQAVSDKVAKIEKHTDSVKRMVDLHHYD YICGDLKALNKNGDVPKQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20456; Mature: 20324
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRIQEIPQSWLTASRPVTEIVKQPSTGLVKDSSLNKDIKTAETQKFLEETDAQMKVIC CCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE AWEMDSTTVDQCIKELCDKIGALYNDVLTTRSQVYEMVLNYGTESGQMVRLREGCNAADR EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCHH DRYLEKLIAYNHIRQAVSDKVAKIEKHTDSVKRMVDLHHYDYICGDLKALNKNGDVPKQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PGRIQEIPQSWLTASRPVTEIVKQPSTGLVKDSSLNKDIKTAETQKFLEETDAQMKVIC CCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE AWEMDSTTVDQCIKELCDKIGALYNDVLTTRSQVYEMVLNYGTESGQMVRLREGCNAADR EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCHH DRYLEKLIAYNHIRQAVSDKVAKIEKHTDSVKRMVDLHHYDYICGDLKALNKNGDVPKQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA