| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yghZ [H]
Identifier: 170023682
GI number: 170023682
Start: 1592678
End: 1593667
Strand: Reverse
Name: yghZ [H]
Synonym: YPK_1441
Alternate gene names: 170023682
Gene position: 1593667-1592678 (Counterclockwise)
Preceding gene: 170023683
Following gene: 170023681
Centisome position: 33.98
GC content: 48.89
Gene sequence:
>990_bases ATGGTTTATCAAGCAAGTTCCTCTCGCTATCAGGAGATGGAGTATCATCGTTGTGGTCGCAGTGGGTTAAAGCTCCCGGC CATTTCTCTCGGTCTTTGGCATAACTTTGGTGACAGCACACGGTATGAAAATAGCCGTAGCCTGATTCACCGAGCGTTTG ATCATGGCATCACCCACTTTGATTTAGCTAATAATTATGGGCCTCCCCCCGGCTCCGCAGAGCTGAATTTTGGCCGCATC CTACAGCAAGACCTGCGCCCTTATCGTGATGAACTGATTATCGCCTCCAAAGCCGGCTATACCATGTGGCCCGGCCCTTA CGGTGACTGGGGGTCGAAGAAATATCTGGTTGCCAGTATCAATCAAAGCCTGCAACGCATGGGGTTGGATTATGTCGATA TCTTCTATCACCACCGTCCTGATCCCAACACGCCGCTAGAAGAAACCATGGTAGCATTGGACCTACTGGTGCGTCAGGGC AAAGCGCTGTATATCGGTTTGTCCAATTATCCTGCAGATCAAGCACAGCTTGCCTGTGAAATTTTGCGTGCACTCGGTAC CCCCTGCCTGATTCATCAGCCAAAATATTCGATGTTTGAACGCGGGATTGAAGCAGGCTTACAAGATACGCTGGATGAAT ATGGTGTCGGCTCTATTGCCTTTTCTCCGTTGGCTGGCGGTTTATTAACTGATCGCTATCTGGCGGGTATCCCAGAAGAC TCACGTGCAGCCAGTGACAGTAAATTCCTTAGCCCTGAACAACTCACCCCTGAAAAACTGGTCAAAATACGCCAATTGAA TGAGTTGGCCCTCGATCGTGGACAAAAATTATCACAGATGTCTTTAGCCTGGGTGTTGCGTGGCGGGAGAGTCACATCGG CACTGATTGGTGCCAGCAAAGTCAGCCAGATTGATGATGCTATCGGCATGTTAGCCAATACAAACTTCAGTGATAAAGAA ATCAACGCTATCGAACATATTTTAGCCTAG
Upstream 100 bases:
>100_bases CAACTTACACAACCGATGAAAACGCATACACTACAATAGCGCTTATTTTTATTATTGCTGCTATCGCTAATGCCGTTCGC TATCACTAATAGAGGCCATC
Downstream 100 bases:
>100_bases ACACTTTCCTATCAAGCTTATCGCTAGGGCACTTCAGGTGCCCTCTGACTGCTGGCTATCGCCCATACAGATAAATCTTA AAACTTTATTTTACAGCTTT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MVYQASSSRYQEMEYHRCGRSGLKLPAISLGLWHNFGDSTRYENSRSLIHRAFDHGITHFDLANNYGPPPGSAELNFGRI LQQDLRPYRDELIIASKAGYTMWPGPYGDWGSKKYLVASINQSLQRMGLDYVDIFYHHRPDPNTPLEETMVALDLLVRQG KALYIGLSNYPADQAQLACEILRALGTPCLIHQPKYSMFERGIEAGLQDTLDEYGVGSIAFSPLAGGLLTDRYLAGIPED SRAASDSKFLSPEQLTPEKLVKIRQLNELALDRGQKLSQMSLAWVLRGGRVTSALIGASKVSQIDDAIGMLANTNFSDKE INAIEHILA
Sequences:
>Translated_329_residues MVYQASSSRYQEMEYHRCGRSGLKLPAISLGLWHNFGDSTRYENSRSLIHRAFDHGITHFDLANNYGPPPGSAELNFGRI LQQDLRPYRDELIIASKAGYTMWPGPYGDWGSKKYLVASINQSLQRMGLDYVDIFYHHRPDPNTPLEETMVALDLLVRQG KALYIGLSNYPADQAQLACEILRALGTPCLIHQPKYSMFERGIEAGLQDTLDEYGVGSIAFSPLAGGLLTDRYLAGIPED SRAASDSKFLSPEQLTPEKLVKIRQLNELALDRGQKLSQMSLAWVLRGGRVTSALIGASKVSQIDDAIGMLANTNFSDKE INAIEHILA >Mature_329_residues MVYQASSSRYQEMEYHRCGRSGLKLPAISLGLWHNFGDSTRYENSRSLIHRAFDHGITHFDLANNYGPPPGSAELNFGRI LQQDLRPYRDELIIASKAGYTMWPGPYGDWGSKKYLVASINQSLQRMGLDYVDIFYHHRPDPNTPLEETMVALDLLVRQG KALYIGLSNYPADQAQLACEILRALGTPCLIHQPKYSMFERGIEAGLQDTLDEYGVGSIAFSPLAGGLLTDRYLAGIPED SRAASDSKFLSPEQLTPEKLVKIRQLNELALDRGQKLSQMSLAWVLRGGRVTSALIGASKVSQIDDAIGMLANTNFSDKE INAIEHILA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504825, Length=342, Percent_Identity=33.9181286549708, Blast_Score=174, Evalue=8e-44, Organism=Homo sapiens, GI27436969, Length=325, Percent_Identity=34.4615384615385, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI27436964, Length=334, Percent_Identity=31.437125748503, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI27436962, Length=325, Percent_Identity=32, Blast_Score=161, Evalue=7e-40, Organism=Homo sapiens, GI27436966, Length=325, Percent_Identity=31.6923076923077, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI27436971, Length=314, Percent_Identity=31.5286624203822, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI41152114, Length=115, Percent_Identity=39.1304347826087, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI223718702, Length=117, Percent_Identity=37.6068376068376, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI41327764, Length=118, Percent_Identity=37.2881355932203, Blast_Score=79, Evalue=7e-15, Organism=Escherichia coli, GI1789375, Length=333, Percent_Identity=55.8558558558559, Blast_Score=385, Evalue=1e-108, Organism=Escherichia coli, GI87081735, Length=312, Percent_Identity=32.6923076923077, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1789199, Length=346, Percent_Identity=28.6127167630058, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788070, Length=323, Percent_Identity=27.5541795665635, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI48994888, Length=298, Percent_Identity=26.510067114094, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788081, Length=203, Percent_Identity=27.0935960591133, Blast_Score=65, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=337, Percent_Identity=26.1127596439169, Blast_Score=90, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6323998, Length=319, Percent_Identity=26.0188087774295, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6319958, Length=300, Percent_Identity=25.3333333333333, Blast_Score=85, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322615, Length=253, Percent_Identity=26.4822134387352, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319951, Length=291, Percent_Identity=24.0549828178694, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640980, Length=326, Percent_Identity=26.0736196319018, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI45549126, Length=327, Percent_Identity=26.2996941896024, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24646155, Length=330, Percent_Identity=28.1818181818182, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24646159, Length=298, Percent_Identity=26.1744966442953, Blast_Score=68, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 36579; Mature: 36579
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYQASSSRYQEMEYHRCGRSGLKLPAISLGLWHNFGDSTRYENSRSLIHRAFDHGITHF CCCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEE DLANNYGPPPGSAELNFGRILQQDLRPYRDELIIASKAGYTMWPGPYGDWGSKKYLVASI ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCEECCCCCCCCCCCCEEHHHH NQSLQRMGLDYVDIFYHHRPDPNTPLEETMVALDLLVRQGKALYIGLSNYPADQAQLACE HHHHHHHCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH ILRALGTPCLIHQPKYSMFERGIEAGLQDTLDEYGVGSIAFSPLAGGLLTDRYLAGIPED HHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHCCCCC SRAASDSKFLSPEQLTPEKLVKIRQLNELALDRGQKLSQMSLAWVLRGGRVTSALIGASK HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH VSQIDDAIGMLANTNFSDKEINAIEHILA HHHHHHHHHHHHCCCCCCHHHHHHHHHHC >Mature Secondary Structure MVYQASSSRYQEMEYHRCGRSGLKLPAISLGLWHNFGDSTRYENSRSLIHRAFDHGITHF CCCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEE DLANNYGPPPGSAELNFGRILQQDLRPYRDELIIASKAGYTMWPGPYGDWGSKKYLVASI ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCEECCCCCCCCCCCCEEHHHH NQSLQRMGLDYVDIFYHHRPDPNTPLEETMVALDLLVRQGKALYIGLSNYPADQAQLACE HHHHHHHCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH ILRALGTPCLIHQPKYSMFERGIEAGLQDTLDEYGVGSIAFSPLAGGLLTDRYLAGIPED HHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHCCCCC SRAASDSKFLSPEQLTPEKLVKIRQLNELALDRGQKLSQMSLAWVLRGGRVTSALIGASK HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH VSQIDDAIGMLANTNFSDKEINAIEHILA HHHHHHHHHHHHCCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]