| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is yfeY [H]
Identifier: 170023640
GI number: 170023640
Start: 1542513
End: 1543124
Strand: Direct
Name: yfeY [H]
Synonym: YPK_1398
Alternate gene names: 170023640
Gene position: 1542513-1543124 (Clockwise)
Preceding gene: 170023637
Following gene: 170023641
Centisome position: 32.89
GC content: 48.86
Gene sequence:
>612_bases ATGAATATTCGCCCAAGGTTGTCTGGGGTGCGTTTGCTATTACTGAGTGCCCCCTTGTTGTTGGCCGGGTGTTCAACGGT GTCTGGTTTCTCTTGGTCAAGTTTATCGCCACTTAACTGGTTTAGCGGTAGTCGCAGTATGCAGGTGACTGAGCAGGGGG TCGGGGGCATCACTGCCAGTACACTGTTGACGGAGAGTGATATCAACGCTGGGTTGCAAGGCGATTACCGTTTACGTAGC GGCATGGCCACCAACGATGGAAAACTTGTTTCTTTCTATCAGGCGCTGAAAGAGGATCAGATAAAACTGGTTATCTCCGG CCAGCCTAAAGGGCAGGTAGAACGTATTGATGTCATGGATAAAGGGATCCCCAGCCAATGGGGGGTTACCATCGGAACGC CATTCAGTGATTTGTACAAAAAAGCATTTGGTGCCTGCCATAAAGGCCGTGGTGATGATGTCAACCAAGTAGAGTGCGTA GCACCGGAGAGTAAACACGTCAGCTATTTATTTAATGGCAACTGGCATGGCCCTGAAGAGTTAATGCCATCAGACGATGC TTTGCAAAGTTGGACGGTGAGTAAGATTATTTGGCGTGCAAAAAGCGAATAA
Upstream 100 bases:
>100_bases CCACTGGTTATCACTTTTTAGCGATTCATATTGGGCTTCTGTGTGCTTTGAGTTGCAGAAACGCTGATGGGATGTCGGGG TTATTTTTAAGGAGCATGAG
Downstream 100 bases:
>100_bases GAATTAATTGCATTTTGCTATTATCACTTGGGCGCTACCTCAGCGCCTTAATATTATTCCTATCCTTGCATTACTCTCTC TTCCCGCTTTATTTTGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MNIRPRLSGVRLLLLSAPLLLAGCSTVSGFSWSSLSPLNWFSGSRSMQVTEQGVGGITASTLLTESDINAGLQGDYRLRS GMATNDGKLVSFYQALKEDQIKLVISGQPKGQVERIDVMDKGIPSQWGVTIGTPFSDLYKKAFGACHKGRGDDVNQVECV APESKHVSYLFNGNWHGPEELMPSDDALQSWTVSKIIWRAKSE
Sequences:
>Translated_203_residues MNIRPRLSGVRLLLLSAPLLLAGCSTVSGFSWSSLSPLNWFSGSRSMQVTEQGVGGITASTLLTESDINAGLQGDYRLRS GMATNDGKLVSFYQALKEDQIKLVISGQPKGQVERIDVMDKGIPSQWGVTIGTPFSDLYKKAFGACHKGRGDDVNQVECV APESKHVSYLFNGNWHGPEELMPSDDALQSWTVSKIIWRAKSE >Mature_203_residues MNIRPRLSGVRLLLLSAPLLLAGCSTVSGFSWSSLSPLNWFSGSRSMQVTEQGVGGITASTLLTESDINAGLQGDYRLRS GMATNDGKLVSFYQALKEDQIKLVISGQPKGQVERIDVMDKGIPSQWGVTIGTPFSDLYKKAFGACHKGRGDDVNQVECV APESKHVSYLFNGNWHGPEELMPSDDALQSWTVSKIIWRAKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788772, Length=193, Percent_Identity=55.440414507772, Blast_Score=222, Evalue=1e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010938 - ProDom: PD105195 [H]
Pfam domain/function: PF06572 DUF1131 [H]
EC number: NA
Molecular weight: Translated: 22121; Mature: 22121
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRPRLSGVRLLLLSAPLLLAGCSTVSGFSWSSLSPLNWFSGSRSMQVTEQGVGGITAS CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEHH TLLTESDINAGLQGDYRLRSGMATNDGKLVSFYQALKEDQIKLVISGQPKGQVERIDVMD HEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEEHHH KGIPSQWGVTIGTPFSDLYKKAFGACHKGRGDDVNQVECVAPESKHVSYLFNGNWHGPEE CCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCCCCHHH LMPSDDALQSWTVSKIIWRAKSE CCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNIRPRLSGVRLLLLSAPLLLAGCSTVSGFSWSSLSPLNWFSGSRSMQVTEQGVGGITAS CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEHH TLLTESDINAGLQGDYRLRSGMATNDGKLVSFYQALKEDQIKLVISGQPKGQVERIDVMD HEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEEHHH KGIPSQWGVTIGTPFSDLYKKAFGACHKGRGDDVNQVECVAPESKHVSYLFNGNWHGPEE CCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCCCCHHH LMPSDDALQSWTVSKIIWRAKSE CCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 7764507 [H]