Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170023637

Identifier: 170023637

GI number: 170023637

Start: 1538445

End: 1538861

Strand: Direct

Name: 170023637

Synonym: YPK_1395

Alternate gene names: NA

Gene position: 1538445-1538861 (Clockwise)

Preceding gene: 170023636

Following gene: 170023640

Centisome position: 32.81

GC content: 31.89

Gene sequence:

>417_bases
ATGAACTTAAAAAGTAAAATCTTTATTTTCTGGGGAATGATGGATCTCTATTATATCGTTAGATATATATGGGTTAGCCT
CTCTGTCGGTAAAATCCCCTTTGTCAGTGATATTAATAATTTTCTGCCCATGGACTTTTCTGATCTACTTATATATAGAG
TTATTGTTATAGGTTCGATGCTAACCACCATTTCAGTGTTGTTTACTGCTTTCTTCTTTTTAAAAAATAAAAAGATAGCG
ATAATGGCTGCTTTTATACAAGAGCCTTTTAGACTTATTTTTGGCGTGTACTCTATTTCATTGATACCTACAGTTATCAA
TGCACTCGGTATGACTATATTAGTGACTAATCTATTCTTCCTTTTTATTTCTGAGGGTTTAAAAATTTACACTTTGCTTA
TTGCCAGGAAGATGTAG

Upstream 100 bases:

>100_bases
TATGGACCTGGTCATTGGGTAGTTATTGATGAGGGCGATGCCTTTTGGCCGGTTTCAGGGAAATCATGGCACGGGATGCC
AGTAACATTGGATAATATTT

Downstream 100 bases:

>100_bases
CTCGAAGTAACGTGGGTAGACATGTTTAATCTATTGAGCAAAAAAATGGTCTCCCGCATTATCGCGGGAAACCACTCATC
TGGTATGTTCTTTAGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MNLKSKIFIFWGMMDLYYIVRYIWVSLSVGKIPFVSDINNFLPMDFSDLLIYRVIVIGSMLTTISVLFTAFFFLKNKKIA
IMAAFIQEPFRLIFGVYSISLIPTVINALGMTILVTNLFFLFISEGLKIYTLLIARKM

Sequences:

>Translated_138_residues
MNLKSKIFIFWGMMDLYYIVRYIWVSLSVGKIPFVSDINNFLPMDFSDLLIYRVIVIGSMLTTISVLFTAFFFLKNKKIA
IMAAFIQEPFRLIFGVYSISLIPTVINALGMTILVTNLFFLFISEGLKIYTLLIARKM
>Mature_138_residues
MNLKSKIFIFWGMMDLYYIVRYIWVSLSVGKIPFVSDINNFLPMDFSDLLIYRVIVIGSMLTTISVLFTAFFFLKNKKIA
IMAAFIQEPFRLIFGVYSISLIPTVINALGMTILVTNLFFLFISEGLKIYTLLIARKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15949; Mature: 15949

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKSKIFIFWGMMDLYYIVRYIWVSLSVGKIPFVSDINNFLPMDFSDLLIYRVIVIGSM
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
LTTISVLFTAFFFLKNKKIAIMAAFIQEPFRLIFGVYSISLIPTVINALGMTILVTNLFF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFISEGLKIYTLLIARKM
HHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MNLKSKIFIFWGMMDLYYIVRYIWVSLSVGKIPFVSDINNFLPMDFSDLLIYRVIVIGSM
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
LTTISVLFTAFFFLKNKKIAIMAAFIQEPFRLIFGVYSISLIPTVINALGMTILVTNLFF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFISEGLKIYTLLIARKM
HHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA