| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yeaL [C]
Identifier: 170023609
GI number: 170023609
Start: 1506755
End: 1507207
Strand: Direct
Name: yeaL [C]
Synonym: YPK_1367
Alternate gene names: 170023609
Gene position: 1506755-1507207 (Clockwise)
Preceding gene: 170023608
Following gene: 170023610
Centisome position: 32.13
GC content: 52.54
Gene sequence:
>453_bases ATGGCCGCTCTTGATCCAACGTTATTGATCCTTTTGGCGCTGGCCGCGCTTGGGATCCTCAGCCATAACATGACAGTGAC ATTGGCAATTCTAATATTGATCGCTATTCGTATTACGCCACTGAACTCATTTTTCCCGTGGGTGGAAAAATACGGGTTAA CCATCGGTGTCTTGATTTTAACTATCGGCGTAATGGCACCAATTGCCAGTGGCAAAATCAGCGCCAGCGAGGTATTGCAC TCATTTGTTCAGTGGAAATCTATCTTAGCCATTGTCGTGGGGGTGGCGGTATCGTGGCTCGGCGGGCGAGGTGTCTCATT GATGACGCACCAACCGTCGGTGGTGGCGGGGCTACTGGTAGGAACGGTGCTCGGCGTCGCCTTGTTCAAAGGCGTCCCTG TCGGGCCATTGATTGCCGCCGGTTTGCTCTCACTGGTCATAGGCAAGTCGTAA
Upstream 100 bases:
>100_bases TCGCTAGGTTTAGCTGATCCGTTAATCGATAATCATAAGATCTATTCTTCTCTGATTGGCACGCTTGTGCCGACATTGAT TGCAATACAGGGATAAAGTC
Downstream 100 bases:
>100_bases GATGACGAATCCAATCGTTGCCAGTCAACCACAGATGGCGCAGCAGGGGATCAGGCGTTTGCTGATCCTCAGTGGTCAGG CCGATTGGTCACGGCAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MAALDPTLLILLALAALGILSHNMTVTLAILILIAIRITPLNSFFPWVEKYGLTIGVLILTIGVMAPIASGKISASEVLH SFVQWKSILAIVVGVAVSWLGGRGVSLMTHQPSVVAGLLVGTVLGVALFKGVPVGPLIAAGLLSLVIGKS
Sequences:
>Translated_150_residues MAALDPTLLILLALAALGILSHNMTVTLAILILIAIRITPLNSFFPWVEKYGLTIGVLILTIGVMAPIASGKISASEVLH SFVQWKSILAIVVGVAVSWLGGRGVSLMTHQPSVVAGLLVGTVLGVALFKGVPVGPLIAAGLLSLVIGKS >Mature_149_residues AALDPTLLILLALAALGILSHNMTVTLAILILIAIRITPLNSFFPWVEKYGLTIGVLILTIGVMAPIASGKISASEVLHS FVQWKSILAIVVGVAVSWLGGRGVSLMTHQPSVVAGLLVGTVLGVALFKGVPVGPLIAAGLLSLVIGKS
Specific function: Unknown
COG id: COG2707
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0756 family [H]
Homologues:
Organism=Escherichia coli, GI1788090, Length=131, Percent_Identity=70.2290076335878, Blast_Score=187, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007382 - ProDom: PD021096 [H]
Pfam domain/function: PF04284 DUF441 [H]
EC number: NA
Molecular weight: Translated: 15409; Mature: 15278
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALDPTLLILLALAALGILSHNMTVTLAILILIAIRITPLNSFFPWVEKYGLTIGVLIL CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH TIGVMAPIASGKISASEVLHSFVQWKSILAIVVGVAVSWLGGRGVSLMTHQPSVVAGLLV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH GTVLGVALFKGVPVGPLIAAGLLSLVIGKS HHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AALDPTLLILLALAALGILSHNMTVTLAILILIAIRITPLNSFFPWVEKYGLTIGVLIL CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH TIGVMAPIASGKISASEVLHSFVQWKSILAIVVGVAVSWLGGRGVSLMTHQPSVVAGLLV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH GTVLGVALFKGVPVGPLIAAGLLSLVIGKS HHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA