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The map label for this gene is ypfJ [H]

Identifier: 170023608

GI number: 170023608

Start: 1505792

End: 1506661

Strand: Direct

Name: ypfJ [H]

Synonym: YPK_1366

Alternate gene names: 170023608

Gene position: 1505792-1506661 (Clockwise)

Preceding gene: 170023606

Following gene: 170023609

Centisome position: 32.11

GC content: 52.07

Gene sequence:

>870_bases
ATGCGTTGGCAAGGTCGTCGTGAAAGTAATAATGTGGAAGATCGTCGCGGGAATGCTTCCGGTGGTGGCGGTGGGTTCCG
GCCCCCAATAAGGGGCAAAGGAGGGGTCGCTATCCTGATTATTGTGTTGGTCGCGGGCTACTACGGCGTTGATCTGACGC
CGCTATTAAATGGCGGTGATCCACTGTCACAAACCCAGACGCCGCCCCGTTCTCCTAAAGCTGTCAGTACGCAAGATGAC
CAATATGCTAAATTCACCTCGGTCATCCTGGCCGATACTGAAGATACCTGGAAACCTATCTTCCAGAAGATGGGCCGGAC
TTATCAGGATCCAAAACTGGTCATGTACCGTGGTGCAACCCGGACCGGTTGTGGTACCGGTCAGTCGGTCATGGGGCCGT
TTTATTGCCCGGCAGATAGCACCATCTATATCGATCTCTCTTTCTATGAAGATATGAAGAATAAATTAGGTGCGGGCGGT
GATTTTGCTCAGGCGTATGTTATTGCTCATGAAGTCGGCCATCACGTACAACATTTGATGGGGATTGATGCGAAGGTTCG
TCAGCAACAGCAGGGCGTTTCTCAGGCGGAAGGTAATCGCTTATCGGTAAAAATGGAGCTGCAAGCCGACTGTTTTGCCG
GGGTTTGGGGCAAAGCGATGGAAGAGCAACAGGTGTTGGAAGCAGGGGATTTACAAGAAGCGCTCAATGCGGCACAGGCC
ATTGGCGATGACCGGCTACAACAGCAAAGCCAGGGCCGCGTCGTGCCAGATAGCTTCACTCACGGAACCTCTCAGCAACG
TTATACCTGGTTTAAGCGTGGTTTTGACAGTGGTGATCCTAATAGCTGTAACACGTTTGCTAGTCGCTAG

Upstream 100 bases:

>100_bases
GTGAAATCCCACCAGTTATATCAATCACCGCTATTTTTAATGGTATTCGATCCATCGATTTCCTACGATACGCGTAGAAA
ATCTGTCTGGGAGTCGTGCT

Downstream 100 bases:

>100_bases
GTTTAGCTGATCCGTTAATCGATAATCATAAGATCTATTCTTCTCTGATTGGCACGCTTGTGCCGACATTGATTGCAATA
CAGGGATAAAGTCATGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRWQGRRESNNVEDRRGNASGGGGGFRPPIRGKGGVAILIIVLVAGYYGVDLTPLLNGGDPLSQTQTPPRSPKAVSTQDD
QYAKFTSVILADTEDTWKPIFQKMGRTYQDPKLVMYRGATRTGCGTGQSVMGPFYCPADSTIYIDLSFYEDMKNKLGAGG
DFAQAYVIAHEVGHHVQHLMGIDAKVRQQQQGVSQAEGNRLSVKMELQADCFAGVWGKAMEEQQVLEAGDLQEALNAAQA
IGDDRLQQQSQGRVVPDSFTHGTSQQRYTWFKRGFDSGDPNSCNTFASR

Sequences:

>Translated_289_residues
MRWQGRRESNNVEDRRGNASGGGGGFRPPIRGKGGVAILIIVLVAGYYGVDLTPLLNGGDPLSQTQTPPRSPKAVSTQDD
QYAKFTSVILADTEDTWKPIFQKMGRTYQDPKLVMYRGATRTGCGTGQSVMGPFYCPADSTIYIDLSFYEDMKNKLGAGG
DFAQAYVIAHEVGHHVQHLMGIDAKVRQQQQGVSQAEGNRLSVKMELQADCFAGVWGKAMEEQQVLEAGDLQEALNAAQA
IGDDRLQQQSQGRVVPDSFTHGTSQQRYTWFKRGFDSGDPNSCNTFASR
>Mature_289_residues
MRWQGRRESNNVEDRRGNASGGGGGFRPPIRGKGGVAILIIVLVAGYYGVDLTPLLNGGDPLSQTQTPPRSPKAVSTQDD
QYAKFTSVILADTEDTWKPIFQKMGRTYQDPKLVMYRGATRTGCGTGQSVMGPFYCPADSTIYIDLSFYEDMKNKLGAGG
DFAQAYVIAHEVGHHVQHLMGIDAKVRQQQQGVSQAEGNRLSVKMELQADCFAGVWGKAMEEQQVLEAGDLQEALNAAQA
IGDDRLQQQSQGRVVPDSFTHGTSQQRYTWFKRGFDSGDPNSCNTFASR

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=289, Percent_Identity=74.3944636678201, Blast_Score=431, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31636; Mature: 31636

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWQGRRESNNVEDRRGNASGGGGGFRPPIRGKGGVAILIIVLVAGYYGVDLTPLLNGGD
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCC
PLSQTQTPPRSPKAVSTQDDQYAKFTSVILADTEDTWKPIFQKMGRTYQDPKLVMYRGAT
CCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCC
RTGCGTGQSVMGPFYCPADSTIYIDLSFYEDMKNKLGAGGDFAQAYVIAHEVGHHVQHLM
CCCCCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
GIDAKVRQQQQGVSQAEGNRLSVKMELQADCFAGVWGKAMEEQQVLEAGDLQEALNAAQA
CCCHHHHHHHHCHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IGDDRLQQQSQGRVVPDSFTHGTSQQRYTWFKRGFDSGDPNSCNTFASR
HCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRWQGRRESNNVEDRRGNASGGGGGFRPPIRGKGGVAILIIVLVAGYYGVDLTPLLNGGD
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCC
PLSQTQTPPRSPKAVSTQDDQYAKFTSVILADTEDTWKPIFQKMGRTYQDPKLVMYRGAT
CCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCC
RTGCGTGQSVMGPFYCPADSTIYIDLSFYEDMKNKLGAGGDFAQAYVIAHEVGHHVQHLM
CCCCCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
GIDAKVRQQQQGVSQAEGNRLSVKMELQADCFAGVWGKAMEEQQVLEAGDLQEALNAAQA
CCCHHHHHHHHCHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IGDDRLQQQSQGRVVPDSFTHGTSQQRYTWFKRGFDSGDPNSCNTFASR
HCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]