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The map label for this gene is yfgC [C]

Identifier: 170023598

GI number: 170023598

Start: 1496778

End: 1498352

Strand: Reverse

Name: yfgC [C]

Synonym: YPK_1356

Alternate gene names: 170023598

Gene position: 1498352-1496778 (Counterclockwise)

Preceding gene: 170023602

Following gene: 170023597

Centisome position: 31.95

GC content: 50.03

Gene sequence:

>1575_bases
ATGATTGTACTGGAGAGCAGTGCAAGGAAGAAGAACTCTTACACATTACGGAGTCTAATTGTCATTACACTAGCAGGGGC
AGTCTCGTTTATGACAAGTCGGTTAAGTAAGACAGTGATCGCCACACTACTCAGTAGCTTGCTGCTCACCGGGCCAATAT
CTGCTGGAGCGGAAACCCAAGGCCTATTACCCGCTCAAGACCTATTACCCGATATAGGTACCTCGGCAGGCGCCACGCTC
AGTATTGATCAGGAAATGGCGATGGGGGACTTTTATGTCCGCCAAATGCGCGCCAGCGCACCATTGATTTATGACCCCTT
ATTGACACAATACATCAATACATTGGGTAACCGGCTGGTTGCTAACGCTAACTCAGTACGCACCCCATTCCATTTCTATC
TGGTGAATAACGATCAGATTAATGCTTTCGCCTTTTTTGGCGGTAACGTCGTGCTTCACTCAGCCCTATTCCGTTATACC
GATAACGAAAGCGAGTTGGCCTCCGTATTAGCTCATGAAATCTCTCACGTTACTCAGCGCCATTTAGCCAGGGCCATGGA
AGAACAACAGCGGCTCGCACCACTCACTTGGGTGGGGGTGTTAGGATCAATTCTGCTAACAATGGCCAGCCCACAAGCAG
GCATGGCAGGATTAAGTGGGACATTGGCTGGCGCTCAGCAAGGTATTATCAGTTTTACTCAAGGCAATGAGCAAGAAGCT
GACCGAATTGGTATTCAGGTATTACAACGTTCCGGGTTTGATCCGCAAGCGATGCCTAATTTCCTGCAAAAACTGGCCGA
TCAGTCACGATATGTCTCTAAACCCCCCGAAATGTTATTGACTCACCCCTTACCAGACAGCCGTTTATCTGATGCCCGTA
ACCGCGCAAATCAGATGAAACCGCACCCTACTGCCTCATCGCAAGATTATCTCTTTGCCAAAATGCGTATTTTAGGTATG
TATGGCGCGGATGAAAATAGCCTGACCCCTGAGCTGCTGGATAAGCTAAGTAAAGGCACGGTACGTGAGCAACTGGCGGC
AAAATACGGTCAGGCAGTCCAGCTTTATCAGGCCAAAAAATATGATGAAGCCCGTAACCTGCTACAACCCCTACTGGCGC
AGCAACCCAGCAATATTTGGTTCCTCGATCTCATGACGGATATCGATCTGGGGCAGAATAAATCAGCCGCTGCCATCGCA
CGTTTACAAAATGCGATGGTAAAACAGAATGATGAACCGGTACTGCAACTGAATCTGGCTAACGCCTATGTTCAGGGGGG
GCAACCGGCAGCAGCCATCAAACTGCTACATCGTTATACTTTTGCCTATCCGAATGATCCGAATGGCTGGGATCTATTGG
CACAAGCGACTGCCACGCAGGGTTTACGCGATCAAGAACTGGCGGCGCGGGCAGAGAGTCTGGCGTTGAGCGGCAAGCTG
ACCCAAGCCATTGGCTTGCTCAGCGATGCCAGTGCGCGGGTGAAGTTGGGCAGCCTGGAACAAGCCCGTTATGATGCCCG
AATTGACCAGTTGCGGCGGTTAAACGAGCGTTTTCGTAAATATCAGAAGTCCTGA

Upstream 100 bases:

>100_bases
ACTGCAGGCTGGCTAAGATAGCGGTGAGTCTCAACAACGGATGATGAGCTTAACCTTTGACGTATTTGAACATATTTTTG
TGATCTAACTCGCTTTCGTG

Downstream 100 bases:

>100_bases
TTATTTGGGGCTATTTGCTGGCAAGCCGTTTGTTTATTGGCAGATAGCATCTGGCCTGTTGATAAACAGTAGGCTAGCTA
AGAGAAAAACAGCAAGGAAA

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MIVLESSARKKNSYTLRSLIVITLAGAVSFMTSRLSKTVIATLLSSLLLTGPISAGAETQGLLPAQDLLPDIGTSAGATL
SIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNRLVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRYT
DNESELASVLAHEISHVTQRHLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQEA
DRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEMLLTHPLPDSRLSDARNRANQMKPHPTASSQDYLFAKMRILGM
YGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQAKKYDEARNLLQPLLAQQPSNIWFLDLMTDIDLGQNKSAAAIA
RLQNAMVKQNDEPVLQLNLANAYVQGGQPAAAIKLLHRYTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGKL
TQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERFRKYQKS

Sequences:

>Translated_524_residues
MIVLESSARKKNSYTLRSLIVITLAGAVSFMTSRLSKTVIATLLSSLLLTGPISAGAETQGLLPAQDLLPDIGTSAGATL
SIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNRLVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRYT
DNESELASVLAHEISHVTQRHLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQEA
DRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEMLLTHPLPDSRLSDARNRANQMKPHPTASSQDYLFAKMRILGM
YGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQAKKYDEARNLLQPLLAQQPSNIWFLDLMTDIDLGQNKSAAAIA
RLQNAMVKQNDEPVLQLNLANAYVQGGQPAAAIKLLHRYTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGKL
TQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERFRKYQKS
>Mature_524_residues
MIVLESSARKKNSYTLRSLIVITLAGAVSFMTSRLSKTVIATLLSSLLLTGPISAGAETQGLLPAQDLLPDIGTSAGATL
SIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNRLVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRYT
DNESELASVLAHEISHVTQRHLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQEA
DRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEMLLTHPLPDSRLSDARNRANQMKPHPTASSQDYLFAKMRILGM
YGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQAKKYDEARNLLQPLLAQQPSNIWFLDLMTDIDLGQNKSAAAIA
RLQNAMVKQNDEPVLQLNLANAYVQGGQPAAAIKLLHRYTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGKL
TQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERFRKYQKS

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=493, Percent_Identity=69.5740365111562, Blast_Score=679, Evalue=0.0,
Organism=Escherichia coli, GI87082185, Length=228, Percent_Identity=27.1929824561404, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 57473; Mature: 57473

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLESSARKKNSYTLRSLIVITLAGAVSFMTSRLSKTVIATLLSSLLLTGPISAGAETQ
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GLLPAQDLLPDIGTSAGATLSIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNRLV
CCCCHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHEE
ANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRYTDNESELASVLAHEISHVTQR
CCCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
HLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQEA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCCHHHH
DRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEMLLTHPLPDSRLSDARNRANQMK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCHHHHHHHHHHHCCC
PHPTASSQDYLFAKMRILGMYGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQAKK
CCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
YDEARNLLQPLLAQQPSNIWFLDLMTDIDLGQNKSAAAIARLQNAMVKQNDEPVLQLNLA
HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEH
NAYVQGGQPAAAIKLLHRYTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGKL
HHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERFRKYQKS
HHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVLESSARKKNSYTLRSLIVITLAGAVSFMTSRLSKTVIATLLSSLLLTGPISAGAETQ
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GLLPAQDLLPDIGTSAGATLSIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNRLV
CCCCHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHEE
ANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRYTDNESELASVLAHEISHVTQR
CCCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
HLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQEA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCCHHHH
DRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEMLLTHPLPDSRLSDARNRANQMK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCHHHHHHHHHHHCCC
PHPTASSQDYLFAKMRILGMYGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQAKK
CCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
YDEARNLLQPLLAQQPSNIWFLDLMTDIDLGQNKSAAAIARLQNAMVKQNDEPVLQLNLA
HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEH
NAYVQGGQPAAAIKLLHRYTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGKL
HHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERFRKYQKS
HHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]