Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is bcp [H]
Identifier: 170023602
GI number: 170023602
Start: 1501625
End: 1502095
Strand: Reverse
Name: bcp [H]
Synonym: YPK_1360
Alternate gene names: 170023602
Gene position: 1502095-1501625 (Counterclockwise)
Preceding gene: 170023603
Following gene: 170023598
Centisome position: 32.03
GC content: 44.37
Gene sequence:
>471_bases ATGAGCCCATTGAAAGCCGGTGATATAGCGCCGAAATTTAGTTTACCCGATCAAGATGGCGAGCAAATTAGTTTGGCCGA CTTCCAGGGACAGCGTGTATTGGTTTATTTTTATCCTAAGGCCATGACACCTGGTTGTACCGTTCAGGCTTGTGGTCTGC GCGATAATATGGATGAACTGAAAAGTGCGGGGGTAGAAGTGCTGGGTATCAGCACCGATAAACCCGAAAAGCTGTCTCGT TTCGCTGAAAAAGAACTCTTAAACTTTACGCTTCTGTCTGATGAACATCATGAAGTTGCGGAACAATTTGGCGTCTGGGG CGAAAAGAGCTTTATGGGTAAAACCTACGATGGCATCCACCGTATCAGCTTCTTAATTGATGCTGACGGTAAGGTGGAAC ATGTGTTTGATAATTTCAAGACTAATAATCATCACGATATCGTGATGGACTACTTACGCCAAAATGCCTAA
Upstream 100 bases:
>100_bases TCGAACATGATTTTTATCAACTCTGTACAGAACTCAACGCGCAGGGCAGTATTAGCGTGGTGAGCTATCCACAGCATGAT GACCGAATGGAGAGTTAGTG
Downstream 100 bases:
>100_bases GGTTTTCTGGCTATTTATTGGTCAATAAAATTAACGGAAAAGAGCGCTCTGGCGCTCTTGAGGTTATTGACAAAGTGCCG GTGGCGGAAATTAAAAATTA
Product: thioredoxin-dependent thiol peroxidase
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSPLKAGDIAPKFSLPDQDGEQISLADFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKSAGVEVLGISTDKPEKLSR FAEKELLNFTLLSDEHHEVAEQFGVWGEKSFMGKTYDGIHRISFLIDADGKVEHVFDNFKTNNHHDIVMDYLRQNA
Sequences:
>Translated_156_residues MSPLKAGDIAPKFSLPDQDGEQISLADFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKSAGVEVLGISTDKPEKLSR FAEKELLNFTLLSDEHHEVAEQFGVWGEKSFMGKTYDGIHRISFLIDADGKVEHVFDNFKTNNHHDIVMDYLRQNA >Mature_155_residues SPLKAGDIAPKFSLPDQDGEQISLADFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKSAGVEVLGISTDKPEKLSRF AEKELLNFTLLSDEHHEVAEQFGVWGEKSFMGKTYDGIHRISFLIDADGKVEHVFDNFKTNNHHDIVMDYLRQNA
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=156, Percent_Identity=87.8205128205128, Blast_Score=297, Evalue=2e-82, Organism=Saccharomyces cerevisiae, GI6322180, Length=108, Percent_Identity=43.5185185185185, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17554; Mature: 17423
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLKAGDIAPKFSLPDQDGEQISLADFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDEL CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEECCCCCCHHHH KSAGVEVLGISTDKPEKLSRFAEKELLNFTLLSDEHHEVAEQFGVWGEKSFMGKTYDGIH HHCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCCCCCCCHHCCE RISFLIDADGKVEHVFDNFKTNNHHDIVMDYLRQNA EEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SPLKAGDIAPKFSLPDQDGEQISLADFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDEL CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEECCCCCCHHHH KSAGVEVLGISTDKPEKLSRFAEKELLNFTLLSDEHHEVAEQFGVWGEKSFMGKTYDGIH HHCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCCCCCCCHHCCE RISFLIDADGKVEHVFDNFKTNNHHDIVMDYLRQNA EEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]