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The map label for this gene is yhcO [H]

Identifier: 170022739

GI number: 170022739

Start: 541399

End: 541680

Strand: Direct

Name: yhcO [H]

Synonym: YPK_0488

Alternate gene names: 170022739

Gene position: 541399-541680 (Clockwise)

Preceding gene: 170022738

Following gene: 170022741

Centisome position: 11.55

GC content: 45.04

Gene sequence:

>282_bases
ATGGTAAAGGTGGTATTCGATTTTAACCATATACCGGATCTTCCTGCATTTTACCGCGCATTTTCTCAGAATTTTGCGCT
GAGCGAAGATTTTGGTGCCAATCTGGATGCGTTGTGGGATGTGGTCACCGGAGAAATAGCGTTACCGGTAGAGATTGAAT
TCGTTCATTTCAGCCGCCGCCATCAACGGCGCTTTGCTGCGATTGTATTGCTATTAGAAGAGGCTGAAGAGGAGTTGGCA
GGGCGTTTACATTTTAATGTCGTTGATGAGCATATTGTTTGA

Upstream 100 bases:

>100_bases
TGTGGGCGTCGTGGTAGTGATCGCTTGCTGTACTCCAATGATGGCCTGATTTATCTGACCCAAGATCACTATAAGCATTT
CATTCGGATGGAGTAAGAAG

Downstream 100 bases:

>100_bases
TAAATGCATTGTTTGATGAATAAATCACTTTGTGAATAGATTATGCCCGCCAACAGTATTGAGTCGGGAGCCGGGAGTGA
CCCGGCCCCGCCCGATTACT

Product: barstar (barnase inhibitor)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MVKVVFDFNHIPDLPAFYRAFSQNFALSEDFGANLDALWDVVTGEIALPVEIEFVHFSRRHQRRFAAIVLLLEEAEEELA
GRLHFNVVDEHIV

Sequences:

>Translated_93_residues
MVKVVFDFNHIPDLPAFYRAFSQNFALSEDFGANLDALWDVVTGEIALPVEIEFVHFSRRHQRRFAAIVLLLEEAEEELA
GRLHFNVVDEHIV
>Mature_93_residues
MVKVVFDFNHIPDLPAFYRAFSQNFALSEDFGANLDALWDVVTGEIALPVEIEFVHFSRRHQRRFAAIVLLLEEAEEELA
GRLHFNVVDEHIV

Specific function: Unknown

COG id: COG2732

COG function: function code K; Barstar, RNAse (barnase) inhibitor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the barstar family [H]

Homologues:

Organism=Escherichia coli, GI1789635, Length=84, Percent_Identity=52.3809523809524, Blast_Score=89, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000468 [H]

Pfam domain/function: PF01337 Barstar [H]

EC number: NA

Molecular weight: Translated: 10739; Mature: 10739

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVVFDFNHIPDLPAFYRAFSQNFALSEDFGANLDALWDVVTGEIALPVEIEFVHFSRR
CEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEECCEEEEEEECHHH
HQRRFAAIVLLLEEAEEELAGRLHFNVVDEHIV
HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC
>Mature Secondary Structure
MVKVVFDFNHIPDLPAFYRAFSQNFALSEDFGANLDALWDVVTGEIALPVEIEFVHFSRR
CEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEECCEEEEEEECHHH
HQRRFAAIVLLLEEAEEELAGRLHFNVVDEHIV
HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]