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The map label for this gene is 170022645

Identifier: 170022645

GI number: 170022645

Start: 426423

End: 426968

Strand: Direct

Name: 170022645

Synonym: YPK_0392

Alternate gene names: NA

Gene position: 426423-426968 (Clockwise)

Preceding gene: 170022644

Following gene: 170022646

Centisome position: 9.09

GC content: 49.45

Gene sequence:

>546_bases
ATGAACAACGCCAGAGGCTATCTCCTGACGTGGGCATTATGTGTAGTGTTCCTATTGTCTGGGTGCAGCGGTGCATGGGA
AGCCACTAAAAAGGTCGGCAAGGTGGTTATGGACCCCGATATTCCGGTGGGGCAGGCTGCTGATCAACCCTCAACGGTCA
GGCTAACATTGCTGTCCGATCGCGATACCAACCCTAATGAAAAAGGGGAAGCGGCCCCGACTGAGATAGTGGTGGTGTAC
CTAAGTGAAAACTCCAAGCTGCTGGCCGCGGATTATGATCAGCTAAGCAGTGACGCGCTGGAGAAAACGCTGGGTAAGAA
TTACATCGATCATCAGGAATACACCTTACTGCCCGATCAATTCAAGGCGCTGGACCCTATCAAACTGGAAGAGAAAAACA
GCTATCTGGGGGTGATTGCTCACTATGCCGATGCTAACCGCAGTGAATGGAAGAAGATCATCAAAATAAAAGGGATCGGC
CATAACTACCAGGTTTTGGTCCATGTCAGATCAAACGATGTCGATCTAAGGAAAGAGGAAGAATAA

Upstream 100 bases:

>100_bases
TGGCCTCCAGCCGCCAGCAAGGTTTTGAAAAACTGTTTGGCGAAGTGTATGAGCAAGCCTATGACCGGGCCTTACGTCAA
GGCATGAAGGATAGCGAGTA

Downstream 100 bases:

>100_bases
CCATGCCAACCAAAAATCGAGTGATTTGGCGCGAAGGGCTGTTCATCAAACCGCAACATTTTCAACAACAGCAACGGCAT
AACGACTACCAGTTACAACG

Product: putative lipoprotein

Products: NA

Alternate protein names: Type VI Secretion Lipoprotein; Type VI Secretion Lipoprotein Family; Type VI Secretion Lipoprotein Family Protein

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNNARGYLLTWALCVVFLLSGCSGAWEATKKVGKVVMDPDIPVGQAADQPSTVRLTLLSDRDTNPNEKGEAAPTEIVVVY
LSENSKLLAADYDQLSSDALEKTLGKNYIDHQEYTLLPDQFKALDPIKLEEKNSYLGVIAHYADANRSEWKKIIKIKGIG
HNYQVLVHVRSNDVDLRKEEE

Sequences:

>Translated_181_residues
MNNARGYLLTWALCVVFLLSGCSGAWEATKKVGKVVMDPDIPVGQAADQPSTVRLTLLSDRDTNPNEKGEAAPTEIVVVY
LSENSKLLAADYDQLSSDALEKTLGKNYIDHQEYTLLPDQFKALDPIKLEEKNSYLGVIAHYADANRSEWKKIIKIKGIG
HNYQVLVHVRSNDVDLRKEEE
>Mature_181_residues
MNNARGYLLTWALCVVFLLSGCSGAWEATKKVGKVVMDPDIPVGQAADQPSTVRLTLLSDRDTNPNEKGEAAPTEIVVVY
LSENSKLLAADYDQLSSDALEKTLGKNYIDHQEYTLLPDQFKALDPIKLEEKNSYLGVIAHYADANRSEWKKIIKIKGIG
HNYQVLVHVRSNDVDLRKEEE

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20218; Mature: 20218

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNARGYLLTWALCVVFLLSGCSGAWEATKKVGKVVMDPDIPVGQAADQPSTVRLTLLSD
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEEEC
RDTNPNEKGEAAPTEIVVVYLSENSKLLAADYDQLSSDALEKTLGKNYIDHQEYTLLPDQ
CCCCCCCCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCEEECCHH
FKALDPIKLEEKNSYLGVIAHYADANRSEWKKIIKIKGIGHNYQVLVHVRSNDVDLRKEE
HCCCCCEEEECCCCEEEEEEEECCCCHHHHHEEEEEECCCCCEEEEEEEECCCCCCCCCC
E
C
>Mature Secondary Structure
MNNARGYLLTWALCVVFLLSGCSGAWEATKKVGKVVMDPDIPVGQAADQPSTVRLTLLSD
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEEEC
RDTNPNEKGEAAPTEIVVVYLSENSKLLAADYDQLSSDALEKTLGKNYIDHQEYTLLPDQ
CCCCCCCCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCEEECCHH
FKALDPIKLEEKNSYLGVIAHYADANRSEWKKIIKIKGIGHNYQVLVHVRSNDVDLRKEE
HCCCCCEEEECCCCEEEEEEEECCCCHHHHHEEEEEECCCCCEEEEEEEECCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA