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The map label for this gene is 170022643

Identifier: 170022643

GI number: 170022643

Start: 423911

End: 424981

Strand: Direct

Name: 170022643

Synonym: YPK_0390

Alternate gene names: NA

Gene position: 423911-424981 (Clockwise)

Preceding gene: 170022642

Following gene: 170022644

Centisome position: 9.04

GC content: 50.33

Gene sequence:

>1071_bases
ATGGCCGGTACAGACAGGTCAACATGCACTGATGTAAGTGTGGTTGAGGATGTAAGTGGGGTTGAGGCAAGACCCGAAGG
GCAGGCATTGGATGTTTCACGTTATAACTTTTTTCAATTGGTCGAATTGCTCAACCAATTGGCGGTAGCGTGGCAAGGTG
CGGCCCCTGTGGCGACCCCAGCCAATGAAGCCATCCGTTTTAAATCGACCGCCAGTTTAGCATTCCCGACCAGAGATGTG
ATCGCACTGGACACCTCCGCCCGAGGTCAATTTGAGCTAGAGGTCTCTTTCCTTGGATTGCATGGCAGCCAATCGCCGCT
ACCAGGATATTACCTCGATTCGTTAGCGTGGGAGGATGCGCAGAATGAGAACCGGTTGACGGATTTCATGAACGTATTCA
ATCACCGCCTGTTAACGCTACTGCATCAGATTTGGCGTAAATACCGTTACTACATCTGCTTTGACAATGGCGGTGATGAT
GCATTTTCACAACGCATGTTCTCGCTGGTGGGGTTAGGTAGCGAGGTCGTCCGCAATAAATTGCAGATCAATCACAGCAA
AATGCTGGCTTATGCAGGGCTGCTGGCTAGCCCCGGCAGAGCACCTGAAGTAATTTGCAGCCTTGTCTCACATTGCTTCA
ATTTGCCAGATATCACCTTACACAGTTGGCAGCTACGCAAGGTGGATATTGCCCCCTCACAGCAGAATCGCTTGGGGATG
AGGGTGAAAGTCCGTGGCAAGAAATATGATGAAAAGTCAGTGCTTGGCGTTAATTTCTCCATCGGTTCACGGGTTGCGGA
TCGTAGCGGGAAATTTTTGTTGTGCATCAATAAGCTGACGCGAGAACAGTTCTTATCCTTTTTACCCAACGGGGCTAATT
ACGCCTCGTTAGTGATGTTTGTCGCCTTCATTATGCGCGATCAATTCGCGTGGGATTTACGTCTTGGGTTGGCCGAGCAA
CAGGTGGGCGGGATGGTTCTGGGAACCGAGCAAAATAGCCTCTTGGGCTGGACCAGTATCCTCGGCGATCCCGAACAGAA
ACCCAGCGTAACGATTGGTGTAATGGAATAA

Upstream 100 bases:

>100_bases
TCTTTAGCACGGTATTAGCTCGCTTCTTCTCACTGTATGCCAGCGTCAATGCGTTTCATCTTTTAAAAGTCATCAATCTT
GATAATCAGGAATGTTACGA

Downstream 100 bases:

>100_bases
CGATCGGTGTAATGGAATAACGGCCGACGCGATGGAATAACGGTCGGCATGATGAAATAACGACCCGCGTTGTGAAATAG
CGATCAGCGTTATGAAATAA

Product: type VI secretion protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein; Type VI Secretion System Protein ImpH; Quinoprotein Dehydrogenase; Replication/Virulence Associated Protein; Type VI Secretion System Protein; Type VI Secretion Protein VasG; T6ss R; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Protein ImpH; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MAGTDRSTCTDVSVVEDVSGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATPANEAIRFKSTASLAFPTRDV
IALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICFDNGGDD
AFSQRMFSLVGLGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIAPSQQNRLGM
RVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMFVAFIMRDQFAWDLRLGLAEQ
QVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME

Sequences:

>Translated_356_residues
MAGTDRSTCTDVSVVEDVSGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATPANEAIRFKSTASLAFPTRDV
IALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICFDNGGDD
AFSQRMFSLVGLGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIAPSQQNRLGM
RVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMFVAFIMRDQFAWDLRLGLAEQ
QVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME
>Mature_355_residues
AGTDRSTCTDVSVVEDVSGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATPANEAIRFKSTASLAFPTRDVI
ALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICFDNGGDDA
FSQRMFSLVGLGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIAPSQQNRLGMR
VKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMFVAFIMRDQFAWDLRLGLAEQQ
VGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39596; Mature: 39465

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTDRSTCTDVSVVEDVSGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATP
CCCCCCCCCCCHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ANEAIRFKSTASLAFPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDA
CCHHEEEECCCCEECCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHCCC
QNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICFDNGGDDAFSQRMFSLVGLGSEVVRNK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHH
LQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIAPSQQNRLGM
HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECEEEEEEECCCCCCCCCCE
RVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMF
EEEECCCCCCCCCEEEEEECCCCHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHH
VAFIMRDQFAWDLRLGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME
HHHHHHHCCHHHHHHCCHHHHHCCEEEECCCCCCEEHHHHCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
AGTDRSTCTDVSVVEDVSGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATP
CCCCCCCCCCHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ANEAIRFKSTASLAFPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDA
CCHHEEEECCCCEECCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHCCC
QNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICFDNGGDDAFSQRMFSLVGLGSEVVRNK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHH
LQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIAPSQQNRLGM
HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECEEEEEEECCCCCCCCCCE
RVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMF
EEEECCCCCCCCCEEEEEECCCCHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHH
VAFIMRDQFAWDLRLGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME
HHHHHHHCCHHHHHHCCHHHHHCCEEEECCCCCCEEHHHHCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA