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The map label for this gene is 170022642

Identifier: 170022642

GI number: 170022642

Start: 422127

End: 423947

Strand: Direct

Name: 170022642

Synonym: YPK_0389

Alternate gene names: NA

Gene position: 422127-423947 (Clockwise)

Preceding gene: 170022641

Following gene: 170022643

Centisome position: 9.0

GC content: 48.93

Gene sequence:

>1821_bases
ATGTCGTTCGAAAAGTATTTCAGGGACGAGCTGGACTACCTCCGGCAATTAGGACGCGATGCCGCAATAGAACGGCCTCA
TCTCGCTGCATTTTTATCTGAGCAAGGTTCTGATCCGGATGTTGAACGTTTGCTGGAAGGCTTTGCTTTTCTAACGGGCA
ACCTGCGTGAAAAAATCGATGATCAATTCCCTGAATTGACTCATGGTTTACTGAATATGTTGTGGCCGAACTACTTACGG
CCAATACCGAGCATGACCATCATCGAGTACACACCGGATGAAAGTGTGGTCACCGAGGCGACGCTGGTGAAACGGGGTAG
CCAAGTGATGAGTATCCCCATCGCACAAAATGGTCAGCGCAGCGCGTTTATCAACAGTAATGCTCATGCCGGGCCACAAT
GTACTTTTACGTTGTGCCGTGATGTGTGGTTGTTCCCCATGTCCATCCGGGAGATCTCGGCGAACAGCAGTAACGAACAA
GGCATTTTGAGTGTTCACTTTGCCGCCAAAGCGGAATTGAACTTACAAGACCTGCAACTGGATAAATTGCGCTTTTATCT
GGGCGAAGACAACTACACCAGCACGCAACTCTATTTCTGGATTAACCACTATTTCGAACGCGCTGAACTGGTTGTCAACG
GGATAACCATCCCGATGCCTGATTTTGACTTTAACCCAGTGGGCTTTGAACGCGATGATGCCCTCTTGCCGTACCCGAAA
AACGCCTATATGGGTTACCGGATCCTGCAAGAGTATTTTTGCTTCCCTGAAGGCTTTTTGTTCTTTGATGTCAATGGTGT
GGTCGATTTTCCGCCGCACTTGAATGCCAGTGAATTCTCTCTGAATTTGTATTTCTCTCAGGCATTGCCGCCGGACGTGA
AAGTCCGCTCCACCACACTGCGGATGAATTGCACACCTGCGGTGAACCTGTTCCAACATGACAGTGAAGCGATTGATCTT
GATGGAACCCAGACGGAATATCCGCTCTGTGTCAGCTACCATAATCCGGATCACTACGACATCTTTTCAGTTGATCGGGT
TGACAGTTGGCTCAGTGAAAAAGGTGCTCCTAAGGGGCGCGGCCGGGGTCATGGCAGGGTGTACACCTCGTTTGAGAGCT
TCCACCATCAGATCGAACACTCGCAAGAAAAGACCGCACTTTATTACCGCCTACGTGTGAAAAATTCATTATTCCGTAAG
GGATTCGAACACTACATTTCCTTTGTTCGCAGTGATGAATCGAAGCTGGTGCTTGCTGAAGAGAATGTCTCGGTCAGCCT
GACGTGCACCAACCGTGAGTTGCCGCTGTCGTTGCGCGTTGGTGATATCAATCAACTCAGCACAGACAGCCCTTCATTCG
CGACGTTCCGCAATATTACCCGTCCTTCCGTGCCGTTGTATCCGGTGCTGGATGGGGGCCTGCATTGGTCATTGCTCTCT
AATATGTCGTTGAACTACATGTCCTTACTGGATAAGGACGCGTTGAAGCAAATTCTGCATACCTATGATTTCCCAAGCCT
GCATAACCGGCAATCTGCCAGGGCATCGCAAAAGAAACTGGACGCTATCCAACGTATTGAAACACAACCGATTGACCGGT
TGTTTCGTGGCTTACCTGTCAGAGGGCTACAAACCACGCTATGGCTGGAGCAAGGGGCCTTTAGCTCTGAAGGCGAGCTT
TATCTCTTTAGCACGGTATTAGCTCGCTTCTTCTCACTGTATGCCAGCGTCAATGCGTTTCATCTTTTAAAAGTCATCAA
TCTTGATAATCAGGAATGTTACGAATGGCCGGTACAGACAGGTCAACATGCACTGATGTAA

Upstream 100 bases:

>100_bases
ATATTAGCGCTCGTGTTAATTTCGACGATATGGGTGATGTCGTTGAGTTCAACATTCAGTTAGACAATAACCGCCGTTAC
TGCTTTAACCAGGAAACATA

Downstream 100 bases:

>100_bases
GTGTGGTTGAGGATGTAAGTGGGGTTGAGGCAAGACCCGAAGGGCAGGCATTGGATGTTTCACGTTATAACTTTTTTCAA
TTGGTCGAATTGCTCAACCA

Product: type VI secretion protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; LOW QUALITY PROTEIN Type VI Secretion Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MSFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKIDDQFPELTHGLLNMLWPNYLR
PIPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQRSAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQ
GILSVHFAAKAELNLQDLQLDKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPK
NAYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPDVKVRSTTLRMNCTPAVNLFQHDSEAIDL
DGTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGAPKGRGRGHGRVYTSFESFHHQIEHSQEKTALYYRLRVKNSLFRK
GFEHYISFVRSDESKLVLAEENVSVSLTCTNRELPLSLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHWSLLS
NMSLNYMSLLDKDALKQILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPVRGLQTTLWLEQGAFSSEGEL
YLFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQTGQHALM

Sequences:

>Translated_606_residues
MSFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKIDDQFPELTHGLLNMLWPNYLR
PIPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQRSAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQ
GILSVHFAAKAELNLQDLQLDKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPK
NAYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPDVKVRSTTLRMNCTPAVNLFQHDSEAIDL
DGTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGAPKGRGRGHGRVYTSFESFHHQIEHSQEKTALYYRLRVKNSLFRK
GFEHYISFVRSDESKLVLAEENVSVSLTCTNRELPLSLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHWSLLS
NMSLNYMSLLDKDALKQILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPVRGLQTTLWLEQGAFSSEGEL
YLFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQTGQHALM
>Mature_605_residues
SFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKIDDQFPELTHGLLNMLWPNYLRP
IPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQRSAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQG
ILSVHFAAKAELNLQDLQLDKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPKN
AYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPDVKVRSTTLRMNCTPAVNLFQHDSEAIDLD
GTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGAPKGRGRGHGRVYTSFESFHHQIEHSQEKTALYYRLRVKNSLFRKG
FEHYISFVRSDESKLVLAEENVSVSLTCTNRELPLSLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHWSLLSN
MSLNYMSLLDKDALKQILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPVRGLQTTLWLEQGAFSSEGELY
LFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQTGQHALM

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69533; Mature: 69402

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKID
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
DQFPELTHGLLNMLWPNYLRPIPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQR
HHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCC
SAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQGILSVHFAAKAELNLQDLQL
CEEECCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCCCCCCEEEEEEEEEECCCHHHCEE
DKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPK
EEEEEEECCCCCCCEEEEEHHHHHHHHHHEEEECEEECCCCCCCCCCCCCCCCCCCCCCC
NAYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPDVKVRSTTL
CCHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEE
RMNCTPAVNLFQHDSEAIDLDGTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGAPKGR
EEECCCHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCC
GRGHGRVYTSFESFHHQIEHSQEKTALYYRLRVKNSLFRKGFEHYISFVRSDESKLVLAE
CCCCCCEEECHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
ENVSVSLTCTNRELPLSLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHWSLLS
CCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCEEHHHHH
NMSLNYMSLLDKDALKQILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPV
CCCCHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
RGLQTTLWLEQGAFSSEGELYLFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQT
CCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCHHEEEEEECCCCHHHHHCCHHC
GQHALM
CCCCCC
>Mature Secondary Structure 
SFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKID
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
DQFPELTHGLLNMLWPNYLRPIPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQR
HHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCC
SAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQGILSVHFAAKAELNLQDLQL
CEEECCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCCCCCCEEEEEEEEEECCCHHHCEE
DKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPK
EEEEEEECCCCCCCEEEEEHHHHHHHHHHEEEECEEECCCCCCCCCCCCCCCCCCCCCCC
NAYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPDVKVRSTTL
CCHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEE
RMNCTPAVNLFQHDSEAIDLDGTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGAPKGR
EEECCCHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCC
GRGHGRVYTSFESFHHQIEHSQEKTALYYRLRVKNSLFRKGFEHYISFVRSDESKLVLAE
CCCCCCEEECHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
ENVSVSLTCTNRELPLSLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHWSLLS
CCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCEEHHHHH
NMSLNYMSLLDKDALKQILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPV
CCCCHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
RGLQTTLWLEQGAFSSEGELYLFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQT
CCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCHHEEEEEECCCCHHHHHCCHHC
GQHALM
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA