| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is murB [H]
Identifier: 170022585
GI number: 170022585
Start: 349642
End: 350679
Strand: Direct
Name: murB [H]
Synonym: YPK_0326
Alternate gene names: 170022585
Gene position: 349642-350679 (Clockwise)
Preceding gene: 170022584
Following gene: 170022586
Centisome position: 7.46
GC content: 43.64
Gene sequence:
>1038_bases ATGTCGAATCAGCGTTCCTCTCTAAAACACCTTAATACCTTTGCGCTACCTGCTTATGCAAGCAATGTCATTAGTGCTGG CTCAGTAGAAACATTAATTGCGGCTTGGCATGAATCAAAAGCCAAGCGACAGCCGGTACTATTACTAGGTGAAGGTAGCA ATGTGTTATTTATTAAAAATTTCTCTGGGACAGTATTACTCAATAGGATTATGGGGATTACTTCTACCGAAGACAGTGCT GCTTGGCATTTACATGTCGGTGCTGGGGAAAATTGGCATCAACTGGTATGTCATTCACTGCAAAATAATATGCCGGGGTT GGAAAATTTAGCGTTAATTCCAGGCTGTGTCGGCTCTGCGCCGATCCAAAATATAGGTGCCTATGGCGTTGAATTAAAAC AAGTATGTGAATATGTTGATTTACTTGATATGGATAAAGGTACTATTCAGCGTATCTCCGCTGAGGAGTGTCAGTTTGGT TACCGTGACAGCATTTTTAAACATCGCTATGGGAATGGATTTGCTATCGTATCTGTCGGTATTAAATTGATGAAATCATG GACTCCAACGCTGGGTTATGGCGACTTAATACATATGGACCCATTAACAGTTACTGCCACAGATATTTTTAACTCTGTCT GTACAATGCGGCGGAGTAAACTTCCAGACCCAATGGTCACTGGCAATGCCGGGAGTTTCTTCAAAAACCCTGTAGTAAGC GCAGCAATCGCTGAGGAGATCGTACATTGTTACCCCAATGCTCCTCATTATCTGCAGCCAGATGGGTCAGTAAAACTTGC AGCAGGTTGGTTGATCGATCAGTGTTCACTTAAGGGGTACCAGATTGGTGGTGCCGCAGTACACCAGCAACAAGCTCTGG TGCTGATTAACCAGTCAGAAGCGACTGGCCAAGATGTAATACATCTTGCACGTTATATCCGCCAGCAGGTCGCACAGAGA TTTTCAATCTGGCTAGAACCAGAGGTACGCTTTATTGCTGATAATGGTGAAGTTAATGCTGTGGAGCATTTATCGTGA
Upstream 100 bases:
>100_bases TCACTACTTTTTCATTATTTACTTGAAATAAAAAATACAAACAGCCCATTACGATCGGTTAGACTAGCGCGAGAGTTATT TAGAATGAGCATCTAATGTA
Downstream 100 bases:
>100_bases AAGATATCAGGGTCCCCTTACGGTTAGTCAGTATATTATCTGATGGTTTTTTTCACTCCGGTGAGCAATTGGGTGAAACG TTAGGCATGAGTCGCGCTGC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSNQRSSLKHLNTFALPAYASNVISAGSVETLIAAWHESKAKRQPVLLLGEGSNVLFIKNFSGTVLLNRIMGITSTEDSA AWHLHVGAGENWHQLVCHSLQNNMPGLENLALIPGCVGSAPIQNIGAYGVELKQVCEYVDLLDMDKGTIQRISAEECQFG YRDSIFKHRYGNGFAIVSVGIKLMKSWTPTLGYGDLIHMDPLTVTATDIFNSVCTMRRSKLPDPMVTGNAGSFFKNPVVS AAIAEEIVHCYPNAPHYLQPDGSVKLAAGWLIDQCSLKGYQIGGAAVHQQQALVLINQSEATGQDVIHLARYIRQQVAQR FSIWLEPEVRFIADNGEVNAVEHLS
Sequences:
>Translated_345_residues MSNQRSSLKHLNTFALPAYASNVISAGSVETLIAAWHESKAKRQPVLLLGEGSNVLFIKNFSGTVLLNRIMGITSTEDSA AWHLHVGAGENWHQLVCHSLQNNMPGLENLALIPGCVGSAPIQNIGAYGVELKQVCEYVDLLDMDKGTIQRISAEECQFG YRDSIFKHRYGNGFAIVSVGIKLMKSWTPTLGYGDLIHMDPLTVTATDIFNSVCTMRRSKLPDPMVTGNAGSFFKNPVVS AAIAEEIVHCYPNAPHYLQPDGSVKLAAGWLIDQCSLKGYQIGGAAVHQQQALVLINQSEATGQDVIHLARYIRQQVAQR FSIWLEPEVRFIADNGEVNAVEHLS >Mature_344_residues SNQRSSLKHLNTFALPAYASNVISAGSVETLIAAWHESKAKRQPVLLLGEGSNVLFIKNFSGTVLLNRIMGITSTEDSAA WHLHVGAGENWHQLVCHSLQNNMPGLENLALIPGCVGSAPIQNIGAYGVELKQVCEYVDLLDMDKGTIQRISAEECQFGY RDSIFKHRYGNGFAIVSVGIKLMKSWTPTLGYGDLIHMDPLTVTATDIFNSVCTMRRSKLPDPMVTGNAGSFFKNPVVSA AIAEEIVHCYPNAPHYLQPDGSVKLAAGWLIDQCSLKGYQIGGAAVHQQQALVLINQSEATGQDVIHLARYIRQQVAQRF SIWLEPEVRFIADNGEVNAVEHLS
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790407, Length=339, Percent_Identity=61.6519174041298, Blast_Score=449, Evalue=1e-127,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 37742; Mature: 37610
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQRSSLKHLNTFALPAYASNVISAGSVETLIAAWHESKAKRQPVLLLGEGSNVLFIKN CCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEC FSGTVLLNRIMGITSTEDSAAWHLHVGAGENWHQLVCHSLQNNMPGLENLALIPGCVGSA CCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCC PIQNIGAYGVELKQVCEYVDLLDMDKGTIQRISAEECQFGYRDSIFKHRYGNGFAIVSVG CHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCHHHHHHHHCCCCEEEHHHH IKLMKSWTPTLGYGDLIHMDPLTVTATDIFNSVCTMRRSKLPDPMVTGNAGSFFKNPVVS HHHHHHCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHCCCCCEEECCCCCHHHCHHHH AAIAEEIVHCYPNAPHYLQPDGSVKLAAGWLIDQCSLKGYQIGGAAVHQQQALVLINQSE HHHHHHHHHHCCCCCCEECCCCCEEEEECEEEECCCCCCEEECCHHHCCCCEEEEEECCC ATGQDVIHLARYIRQQVAQRFSIWLEPEVRFIADNGEVNAVEHLS CCHHHHHHHHHHHHHHHHHHHCEEECCCEEEEECCCCCCCCCCCC >Mature Secondary Structure SNQRSSLKHLNTFALPAYASNVISAGSVETLIAAWHESKAKRQPVLLLGEGSNVLFIKN CCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEC FSGTVLLNRIMGITSTEDSAAWHLHVGAGENWHQLVCHSLQNNMPGLENLALIPGCVGSA CCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCC PIQNIGAYGVELKQVCEYVDLLDMDKGTIQRISAEECQFGYRDSIFKHRYGNGFAIVSVG CHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCHHHHHHHHCCCCEEEHHHH IKLMKSWTPTLGYGDLIHMDPLTVTATDIFNSVCTMRRSKLPDPMVTGNAGSFFKNPVVS HHHHHHCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHCCCCCEEECCCCCHHHCHHHH AAIAEEIVHCYPNAPHYLQPDGSVKLAAGWLIDQCSLKGYQIGGAAVHQQQALVLINQSE HHHHHHHHHHCCCCCCEECCCCCEEEEECEEEECCCCCCEEECCHHHCCCCEEEEEECCC ATGQDVIHLARYIRQQVAQRFSIWLEPEVRFIADNGEVNAVEHLS CCHHHHHHHHHHHHHHHHHHHCEEECCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]