Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629559
Identifier: 169629559
GI number: 169629559
Start: 2525932
End: 2526597
Strand: Reverse
Name: 169629559
Synonym: MAB_2473c
Alternate gene names: NA
Gene position: 2526597-2525932 (Counterclockwise)
Preceding gene: 169629561
Following gene: 169629558
Centisome position: 49.86
GC content: 64.26
Gene sequence:
>666_bases ATGACCGACCACGACCGCCTTGCTACCCGCCGCGAGATTGCCGACGCACTCACGAGCGCCTTCGAACGGCGCCACGAAGT GCTTGATCTGATTGTGGAAGCCGACGACCGAAAGAGTGCCATCGATGCGATCGCCACTCTGCTTGGCACCTCCCATTTGG GCGGCGAGGCGGTCATGGGCATGTCGTTCGACAAGCTGACCAAGGATGAGCGCCGCAAGAACGCCGCGGAGCTCGAGGAC CTTAACAGCCAACTCACCTTCACTCTCATGGAACGCCCCGCAAGCTCGGGAGACACCCTGGAACTGCGCCCCTTCTCCGG CAGCAGCGATGCCGACATCTTCGCGGTGCGTACCGAAGAAGTCGGCCAGGCCGGTGACGGATCCGGCGCGCCCGCAGGCG TGCTGGAAGATGAGCTGCAAGCAGCACTGGCGCGGATCGACGACGAGGAGGCCGCCTGGTTCGTCGCAGTGGAAGGTCCC AGCAAGGTCGGCATCGTCTTCGGCGAGCTGGTCGACGGCGAGGTGAATGTCCGAATCTGGGTTCACCCCGACCATCGAAA GAAGGGTTACGGCACAGCTGCTTTGCGCAAGTCTCGTTCGGTGATGGCCGCCTACTTCCCCGCGGTCCCCATGGTGGTGC GGGCCCCGGGAGTCGATGCCCCCTGA
Upstream 100 bases:
>100_bases GTGACCGAACGGTGACACTGAGTGCCGGTGCGCGCCGAAGTCAACCTTTGTGCTCAACGTTTCTTGAGCGCCGCCGGCCG ACCGGTCGTAGGCTGGCGCC
Downstream 100 bases:
>100_bases GCTCTCGGGATCACACACCCGTCAAGAGCATTGATCAATGTGCTTGATGCGCTGACGAATTGGCGACAGTTCGCGAGCGA CACGCCATCCGTTCGCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTDHDRLATRREIADALTSAFERRHEVLDLIVEADDRKSAIDAIATLLGTSHLGGEAVMGMSFDKLTKDERRKNAAELED LNSQLTFTLMERPASSGDTLELRPFSGSSDADIFAVRTEEVGQAGDGSGAPAGVLEDELQAALARIDDEEAAWFVAVEGP SKVGIVFGELVDGEVNVRIWVHPDHRKKGYGTAALRKSRSVMAAYFPAVPMVVRAPGVDAP
Sequences:
>Translated_221_residues MTDHDRLATRREIADALTSAFERRHEVLDLIVEADDRKSAIDAIATLLGTSHLGGEAVMGMSFDKLTKDERRKNAAELED LNSQLTFTLMERPASSGDTLELRPFSGSSDADIFAVRTEEVGQAGDGSGAPAGVLEDELQAALARIDDEEAAWFVAVEGP SKVGIVFGELVDGEVNVRIWVHPDHRKKGYGTAALRKSRSVMAAYFPAVPMVVRAPGVDAP >Mature_220_residues TDHDRLATRREIADALTSAFERRHEVLDLIVEADDRKSAIDAIATLLGTSHLGGEAVMGMSFDKLTKDERRKNAAELEDL NSQLTFTLMERPASSGDTLELRPFSGSSDADIFAVRTEEVGQAGDGSGAPAGVLEDELQAALARIDDEEAAWFVAVEGPS KVGIVFGELVDGEVNVRIWVHPDHRKKGYGTAALRKSRSVMAAYFPAVPMVVRAPGVDAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23833; Mature: 23702
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHDRLATRREIADALTSAFERRHEVLDLIVEADDRKSAIDAIATLLGTSHLGGEAVMG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEC MSFDKLTKDERRKNAAELEDLNSQLTFTLMERPASSGDTLELRPFSGSSDADIFAVRTEE CCHHHHCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECHH VGQAGDGSGAPAGVLEDELQAALARIDDEEAAWFVAVEGPSKVGIVFGELVDGEVNVRIW HCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEECCEEEEEEE VHPDHRKKGYGTAALRKSRSVMAAYFPAVPMVVRAPGVDAP ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC >Mature Secondary Structure TDHDRLATRREIADALTSAFERRHEVLDLIVEADDRKSAIDAIATLLGTSHLGGEAVMG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEC MSFDKLTKDERRKNAAELEDLNSQLTFTLMERPASSGDTLELRPFSGSSDADIFAVRTEE CCHHHHCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECHH VGQAGDGSGAPAGVLEDELQAALARIDDEEAAWFVAVEGPSKVGIVFGELVDGEVNVRIW HCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEECCEEEEEEE VHPDHRKKGYGTAALRKSRSVMAAYFPAVPMVVRAPGVDAP ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA