Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629561
Identifier: 169629561
GI number: 169629561
Start: 2527426
End: 2527872
Strand: Reverse
Name: 169629561
Synonym: MAB_2475c
Alternate gene names: NA
Gene position: 2527872-2527426 (Counterclockwise)
Preceding gene: 169629563
Following gene: 169629559
Centisome position: 49.89
GC content: 57.49
Gene sequence:
>447_bases GTGGCTGAGCAGGTTGGGGACCTCACGACTGTCACATTCGAGTACCACTACTCGTATCCGGCCCACGAAGTGTGGACGAT ACTTATCTCACCGCAATTGTTCGGGCAGTGGATCAAGGACTTTGAAACAACGAGATACGAGACCGGAGTTGCCTTTTCGT TCAGCGTCTTCCCGTTCATGGGCAGCGGATTCGTCGGAGAGATCGACGGTAGTTTCACCAGGGTTGTCGCCGACGAGTTG TTGGCATACCGGCTGACCACGCGCGACGGTTCGATCACCATCGACTCTCGATGGACGTTGAATCCAGATCCGGGCGGGAC GCTGCTATTGGTCGACGCGGCCGGTTTCAAGCCCGATGATCAGGATCAGATGCGGTTCAGGCAGCTGTGTCTTGTCGGAT GGCCCACGGTGCTGCAGCGGATCGACGAGCTTCTGCACGAACGCTGA
Upstream 100 bases:
>100_bases TGCCATCAGCACGATCAAGATCACGCGCGGGCGCGGCGATGGGATTAGGTTGTTTGCGTCCACTCCGTCGATGAGCAGTG TGCACGAAAGGTATGTTTGG
Downstream 100 bases:
>100_bases TCGCACGGAAAGCTCGTGACGCGGATGCTCACTCGATCACGCGCACCAGGTACGGGGCCATGTCGTTGAAACGAACCTGC GATACCTGCACCGCGGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MAEQVGDLTTVTFEYHYSYPAHEVWTILISPQLFGQWIKDFETTRYETGVAFSFSVFPFMGSGFVGEIDGSFTRVVADEL LAYRLTTRDGSITIDSRWTLNPDPGGTLLLVDAAGFKPDDQDQMRFRQLCLVGWPTVLQRIDELLHER
Sequences:
>Translated_148_residues MAEQVGDLTTVTFEYHYSYPAHEVWTILISPQLFGQWIKDFETTRYETGVAFSFSVFPFMGSGFVGEIDGSFTRVVADEL LAYRLTTRDGSITIDSRWTLNPDPGGTLLLVDAAGFKPDDQDQMRFRQLCLVGWPTVLQRIDELLHER >Mature_147_residues AEQVGDLTTVTFEYHYSYPAHEVWTILISPQLFGQWIKDFETTRYETGVAFSFSVFPFMGSGFVGEIDGSFTRVVADELL AYRLTTRDGSITIDSRWTLNPDPGGTLLLVDAAGFKPDDQDQMRFRQLCLVGWPTVLQRIDELLHER
Specific function: Unknown
COG id: COG3832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16876; Mature: 16745
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQVGDLTTVTFEYHYSYPAHEVWTILISPQLFGQWIKDFETTRYETGVAFSFSVFPFM CCCCCCCEEEEEEEEEECCCHHHEEEEEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCC GSGFVGEIDGSFTRVVADELLAYRLTTRDGSITIDSRWTLNPDPGGTLLLVDAAGFKPDD CCCCEECCCCCHHHHHHHHHHHEEEECCCCCEEECCEEEECCCCCCEEEEEECCCCCCCC QDQMRFRQLCLVGWPTVLQRIDELLHER HHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure AEQVGDLTTVTFEYHYSYPAHEVWTILISPQLFGQWIKDFETTRYETGVAFSFSVFPFM CCCCCCEEEEEEEEEECCCHHHEEEEEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCC GSGFVGEIDGSFTRVVADELLAYRLTTRDGSITIDSRWTLNPDPGGTLLLVDAAGFKPDD CCCCEECCCCCHHHHHHHHHHHEEEECCCCCEEECCEEEECCCCCCEEEEEECCCCCCCC QDQMRFRQLCLVGWPTVLQRIDELLHER HHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA