Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629540
Identifier: 169629540
GI number: 169629540
Start: 2509727
End: 2510506
Strand: Reverse
Name: 169629540
Synonym: MAB_2454c
Alternate gene names: NA
Gene position: 2510506-2509727 (Counterclockwise)
Preceding gene: 169629541
Following gene: 169629539
Centisome position: 49.54
GC content: 69.49
Gene sequence:
>780_bases ATGGCGGGACGCTATGTGGCATTGGGAAGTTCGATGGCGGCGGGGCCAGGGATCATGCCCCGCGCGCAGGGATCACCACG CCTGGCAGGGCGGTCGGCGCGCAATTACCCGCATCAGATCGCCGAGCGTCAGGGCTACCAGCTCGTCGACGTCACCTATT CCGGGGCGACCACGGCACATATCCTGACCGACTCGCACAACAACGACCCCCCTCAGATCGACGCGCTCGATGGCACCGAG GAGCTGGTCACGGTGACCGTCGGCGGCAACGACGTCGGGTACGTACCGTTTCTGGTTGCCGCCTCGCTACCGCGCATCCT GCACGCCCTGCCCGTCGTCGGTCGTGCGCTGGACGCGCTGCTGGACCCGAACAAGCGCAAGGAAGCGTGCGCCGTCATCG GGAAGTCACTGCGCGCGGTGGGTGAGCAGGTGCGGGACCGGTCCCCGCGGGCCCGGGTGATCTTCGTCGACTACCTCTCG TTGTTGCCACCCGAGGGCCAGCCCGCCCCTCCGTACACCCTGCAGCAGAGCACCACGGGGCATCGCATCGCCGCGGCACT GGCGGCGGCCACCGCGGAGGCCGCGCAGGCCGCTGGCTGCGAAATCGTTCACGCGTCCACGGCCAGCGCGGATCATCACG CGTGGTCGGCGCGGCCCTGGACGACGCGGCCCGCCATCCCCTGGCCCTGGCGTCCGGCGCCGCTGCACCCCAACGAGGAC GGTATGACCGCCGTCGCCGATCTCGTTGTGGCCCTATTGAACGCCGCGTCTAATGACTGA
Upstream 100 bases:
>100_bases GCAGGGTTGGCCCGTCTTACGGCTGGAGGATCCGCGCCCACGGGGAATGAGGCCATCGCTGCGCCGGCTTGCCGGGCTGG CTCGACCATAAGGTTGGCAT
Downstream 100 bases:
>100_bases GGTTGCGCCCTGAGCCGGCGACCACATTGCGATACTTGATGCCGTGCGCACAACTTCCCTGCTGATGGCTCCCGTCTTCG CGACCGCGATGGGGGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: GDSL Family Lipase; Lipolytic Protein G-D-S-L Family; GDSL-Like Lipase/Acylhydrolase; Hydrolase; Esterase
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MAGRYVALGSSMAAGPGIMPRAQGSPRLAGRSARNYPHQIAERQGYQLVDVTYSGATTAHILTDSHNNDPPQIDALDGTE ELVTVTVGGNDVGYVPFLVAASLPRILHALPVVGRALDALLDPNKRKEACAVIGKSLRAVGEQVRDRSPRARVIFVDYLS LLPPEGQPAPPYTLQQSTTGHRIAAALAAATAEAAQAAGCEIVHASTASADHHAWSARPWTTRPAIPWPWRPAPLHPNED GMTAVADLVVALLNAASND
Sequences:
>Translated_259_residues MAGRYVALGSSMAAGPGIMPRAQGSPRLAGRSARNYPHQIAERQGYQLVDVTYSGATTAHILTDSHNNDPPQIDALDGTE ELVTVTVGGNDVGYVPFLVAASLPRILHALPVVGRALDALLDPNKRKEACAVIGKSLRAVGEQVRDRSPRARVIFVDYLS LLPPEGQPAPPYTLQQSTTGHRIAAALAAATAEAAQAAGCEIVHASTASADHHAWSARPWTTRPAIPWPWRPAPLHPNED GMTAVADLVVALLNAASND >Mature_258_residues AGRYVALGSSMAAGPGIMPRAQGSPRLAGRSARNYPHQIAERQGYQLVDVTYSGATTAHILTDSHNNDPPQIDALDGTEE LVTVTVGGNDVGYVPFLVAASLPRILHALPVVGRALDALLDPNKRKEACAVIGKSLRAVGEQVRDRSPRARVIFVDYLSL LPPEGQPAPPYTLQQSTTGHRIAAALAAATAEAAQAAGCEIVHASTASADHHAWSARPWTTRPAIPWPWRPAPLHPNEDG MTAVADLVVALLNAASND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27313; Mature: 27182
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRYVALGSSMAAGPGIMPRAQGSPRLAGRSARNYPHQIAERQGYQLVDVTYSGATTAH CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCEEEE ILTDSHNNDPPQIDALDGTEELVTVTVGGNDVGYVPFLVAASLPRILHALPVVGRALDAL EEECCCCCCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LDPNKRKEACAVIGKSLRAVGEQVRDRSPRARVIFVDYLSLLPPEGQPAPPYTLQQSTTG HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCCCCEECCCCCC HRIAAALAAATAEAAQAAGCEIVHASTASADHHAWSARPWTTRPAIPWPWRPAPLHPNED HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GMTAVADLVVALLNAASND CHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AGRYVALGSSMAAGPGIMPRAQGSPRLAGRSARNYPHQIAERQGYQLVDVTYSGATTAH CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCEEEE ILTDSHNNDPPQIDALDGTEELVTVTVGGNDVGYVPFLVAASLPRILHALPVVGRALDAL EEECCCCCCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LDPNKRKEACAVIGKSLRAVGEQVRDRSPRARVIFVDYLSLLPPEGQPAPPYTLQQSTTG HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCCCCEECCCCCC HRIAAALAAATAEAAQAAGCEIVHASTASADHHAWSARPWTTRPAIPWPWRPAPLHPNED HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GMTAVADLVVALLNAASND CHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA