Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629541
Identifier: 169629541
GI number: 169629541
Start: 2510516
End: 2511289
Strand: Reverse
Name: 169629541
Synonym: MAB_2455c
Alternate gene names: NA
Gene position: 2511289-2510516 (Counterclockwise)
Preceding gene: 169629543
Following gene: 169629540
Centisome position: 49.56
GC content: 63.95
Gene sequence:
>774_bases ATGACGGCCAACTCGACGCCTCATCCGGTGGCCGACATAGCACTGAGCCCCGTGGGATCAGAGGTTGGAGCGTTCTTCGA CCTGGACGGCACGCTCGTGGCCGGCTTCACACCCACGGCACATGCTCGTGACCGGATGCGCCGGCGCCAGGCCAGCGTAG GCGAGGTACTCGGCGTACTGGAGGCCACTTTCCGGTACAAGCTGGGCCGCATGGAGTTCGAGCGTTTGGTGGTGCGGGCC GCCGGATACCTGCGCGGCGACTCGCTGGCGGAACTCGAAGCGGTGGGTGAACGAATCTTCCACCAGCACAACGCCGCAAT GATCTATCCGCAGATGCGCGAGCGGGTCAGCGCACATCAGAATCAGGGCCACACCGTGGTATTGAGCTCCTCGGCGCTGA CCATCCACGCAGAGCCGGTGGCACGTCACCTCGGGATAACCCATGTGCTGTGCAACCACTTCGATGTCGACAATCGCGGA CTGCTCACCGGCGACATCCGCAAGCCCATCGTGTGGGGACGCAACAAGGCCTCTGTGGTACGAAGTTTTTGTGAAACCAA CGGCGTTGACCTGCAGCGCAGTTATTTCTACGCCGATGGCGAGGAGGACATAGACCTGATGGCCCTTGTCGGCGAACCTC GCCCCGTCAATCCGCGCGGCAGGCTGGCGGTGATGGCTGCCGAGCAGGGTTGGCCCGTCTTACGGCTGGAGGATCCGCGC CCACGGGGAATGAGGCCATCGCTGCGCCGGCTTGCCGGGCTGGCTCGACCATAA
Upstream 100 bases:
>100_bases CCGTGCGCCTGGTCATCAACGCGGGACGCGATTGCGGGTCCATGGCCTCATCTTGTCGCCTGCAGCCGGTGAGTGTGCCG TGCAACGGTAGATTGACGGA
Downstream 100 bases:
>100_bases GGTTGGCATATGGCGGGACGCTATGTGGCATTGGGAAGTTCGATGGCGGCGGGGCCAGGGATCATGCCCCGCGCGCAGGG ATCACCACGCCTGGCAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTANSTPHPVADIALSPVGSEVGAFFDLDGTLVAGFTPTAHARDRMRRRQASVGEVLGVLEATFRYKLGRMEFERLVVRA AGYLRGDSLAELEAVGERIFHQHNAAMIYPQMRERVSAHQNQGHTVVLSSSALTIHAEPVARHLGITHVLCNHFDVDNRG LLTGDIRKPIVWGRNKASVVRSFCETNGVDLQRSYFYADGEEDIDLMALVGEPRPVNPRGRLAVMAAEQGWPVLRLEDPR PRGMRPSLRRLAGLARP
Sequences:
>Translated_257_residues MTANSTPHPVADIALSPVGSEVGAFFDLDGTLVAGFTPTAHARDRMRRRQASVGEVLGVLEATFRYKLGRMEFERLVVRA AGYLRGDSLAELEAVGERIFHQHNAAMIYPQMRERVSAHQNQGHTVVLSSSALTIHAEPVARHLGITHVLCNHFDVDNRG LLTGDIRKPIVWGRNKASVVRSFCETNGVDLQRSYFYADGEEDIDLMALVGEPRPVNPRGRLAVMAAEQGWPVLRLEDPR PRGMRPSLRRLAGLARP >Mature_256_residues TANSTPHPVADIALSPVGSEVGAFFDLDGTLVAGFTPTAHARDRMRRRQASVGEVLGVLEATFRYKLGRMEFERLVVRAA GYLRGDSLAELEAVGERIFHQHNAAMIYPQMRERVSAHQNQGHTVVLSSSALTIHAEPVARHLGITHVLCNHFDVDNRGL LTGDIRKPIVWGRNKASVVRSFCETNGVDLQRSYFYADGEEDIDLMALVGEPRPVNPRGRLAVMAAEQGWPVLRLEDPRP RGMRPSLRRLAGLARP
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 28433; Mature: 28302
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANSTPHPVADIALSPVGSEVGAFFDLDGTLVAGFTPTAHARDRMRRRQASVGEVLGVL CCCCCCCCCHHHHEECCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH EATFRYKLGRMEFERLVVRAAGYLRGDSLAELEAVGERIFHQHNAAMIYPQMRERVSAHQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHC NQGHTVVLSSSALTIHAEPVARHLGITHVLCNHFDVDNRGLLTGDIRKPIVWGRNKASVV CCCCEEEEECCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCHHHHH RSFCETNGVDLQRSYFYADGEEDIDLMALVGEPRPVNPRGRLAVMAAEQGWPVLRLEDPR HHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCC PRGMRPSLRRLAGLARP CCCCCHHHHHHHCCCCC >Mature Secondary Structure TANSTPHPVADIALSPVGSEVGAFFDLDGTLVAGFTPTAHARDRMRRRQASVGEVLGVL CCCCCCCCHHHHEECCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH EATFRYKLGRMEFERLVVRAAGYLRGDSLAELEAVGERIFHQHNAAMIYPQMRERVSAHQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHC NQGHTVVLSSSALTIHAEPVARHLGITHVLCNHFDVDNRGLLTGDIRKPIVWGRNKASVV CCCCEEEEECCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCHHHHH RSFCETNGVDLQRSYFYADGEEDIDLMALVGEPRPVNPRGRLAVMAAEQGWPVLRLEDPR HHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCC PRGMRPSLRRLAGLARP CCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]