| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629500
Identifier: 169629500
GI number: 169629500
Start: 2474690
End: 2475655
Strand: Reverse
Name: 169629500
Synonym: MAB_2414c
Alternate gene names: NA
Gene position: 2475655-2474690 (Counterclockwise)
Preceding gene: 169629501
Following gene: 169629499
Centisome position: 48.86
GC content: 68.84
Gene sequence:
>966_bases GTGTCCGCCCTGGCGTTCGCGATACTCGCGCTGCTGCTGACCGGTCCCGTACCGGCGTTGCTCGCGCGTGCGCGTTGGCC CTACCGCGCACCACGGGCAGCCATGGTGCTGTGGCAGGCCATCGCCGTGGCCGCCGTGTTGTCGGCGTTCAGTTCCGGGC TCGCCATTGCGAGCAGGCTGCTCGTGCCAGGCCCGGACGGCCATCCGACCGCCACCATCACCGGCGAAATCGACCGTCTT GGTTGGGGTTTGTGGCTGCTTTACGTCACAGTATTCGCGATCACGATCCTCATCGGCGTCCGCCTGATGGTCTCGGTGGT ACGGGTGGGGGTACGCACCCGGCGCCGCCGCGCCCGCCACCGCGCCATCGTTGATCTGCTGGATCACAAACGCTACTGCG AGAACTGGCGCGGCGGCTACGACATCAACCGCCGTCGCGATCACGATCTACGCGTTCTGGAAGTCGATGAGCCGCTGGCC TACTGTCTGCCGGGCGTACGCAGCCGGGTGGTCGTCAGTGAGGGGACGCTGAGCACCTTGGGGCACAACGAGGTCACCGC GATCGTGGCACACGAGCGGGCCCATCTGCGTGCCCGGCACGATCTGGTGCTGGAGGCGTTCACCGCCGTCCACGACGCGT TCCCCGTCATCGTGCGCAGCAAGAGCGCGCTCGACGCGGTCAAACTACTGGTCGAGTTGCTCGCCGACGACGCCGCCGTC CGCACCGCCGGCCCGACTCCGCTGGCCCGCGCGTTGGTCGCTTGTGCCGGCGGCCCGACGCCGGTCGGCGCGATGGCCGC AGGCGGGCCCACCACCCTGATCCGGGTCCGCCGCCTCGGCGGAAGTGGAAACAGCCTGCTGCTGTCGTGCAGCGCCTACA CCGCGGCCGCCGCAATCCTGGTGGTGCCCACGTTGGCCGTCGTCATCCCGTGGTTCACCGAACTTCAGCGCCTCTTCAGC AAGTGA
Upstream 100 bases:
>100_bases GCCCGGACGAGGCCGACGCGCTGCGCCGGGCACTGGCCGATCTCGAGGCGAAAGATCCATCTGCTGGCGGTCGCCCCACC GAGTAAGGGACACTAGTTAT
Downstream 100 bases:
>100_bases CCCGCCAGTAGGTGCCCCGCGCTCGCGAGCCGAAAGCGACTGCGCGAGAATCGGTGATGAGGCGCCCCTATGTGGGAGCG CTCCCCGGCTTGCGCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Zn-Dependent Protease With Chaperone Function; Metallopeptidase; Peptidase M
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSALAFAILALLLTGPVPALLARARWPYRAPRAAMVLWQAIAVAAVLSAFSSGLAIASRLLVPGPDGHPTATITGEIDRL GWGLWLLYVTVFAITILIGVRLMVSVVRVGVRTRRRRARHRAIVDLLDHKRYCENWRGGYDINRRRDHDLRVLEVDEPLA YCLPGVRSRVVVSEGTLSTLGHNEVTAIVAHERAHLRARHDLVLEAFTAVHDAFPVIVRSKSALDAVKLLVELLADDAAV RTAGPTPLARALVACAGGPTPVGAMAAGGPTTLIRVRRLGGSGNSLLLSCSAYTAAAAILVVPTLAVVIPWFTELQRLFS K
Sequences:
>Translated_321_residues MSALAFAILALLLTGPVPALLARARWPYRAPRAAMVLWQAIAVAAVLSAFSSGLAIASRLLVPGPDGHPTATITGEIDRL GWGLWLLYVTVFAITILIGVRLMVSVVRVGVRTRRRRARHRAIVDLLDHKRYCENWRGGYDINRRRDHDLRVLEVDEPLA YCLPGVRSRVVVSEGTLSTLGHNEVTAIVAHERAHLRARHDLVLEAFTAVHDAFPVIVRSKSALDAVKLLVELLADDAAV RTAGPTPLARALVACAGGPTPVGAMAAGGPTTLIRVRRLGGSGNSLLLSCSAYTAAAAILVVPTLAVVIPWFTELQRLFS K >Mature_320_residues SALAFAILALLLTGPVPALLARARWPYRAPRAAMVLWQAIAVAAVLSAFSSGLAIASRLLVPGPDGHPTATITGEIDRLG WGLWLLYVTVFAITILIGVRLMVSVVRVGVRTRRRRARHRAIVDLLDHKRYCENWRGGYDINRRRDHDLRVLEVDEPLAY CLPGVRSRVVVSEGTLSTLGHNEVTAIVAHERAHLRARHDLVLEAFTAVHDAFPVIVRSKSALDAVKLLVELLADDAAVR TAGPTPLARALVACAGGPTPVGAMAAGGPTTLIRVRRLGGSGNSLLLSCSAYTAAAAILVVPTLAVVIPWFTELQRLFSK
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34531; Mature: 34400
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALAFAILALLLTGPVPALLARARWPYRAPRAAMVLWQAIAVAAVLSAFSSGLAIASRL CHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPGPDGHPTATITGEIDRLGWGLWLLYVTVFAITILIGVRLMVSVVRVGVRTRRRRARH CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAIVDLLDHKRYCENWRGGYDINRRRDHDLRVLEVDEPLAYCLPGVRSRVVVSEGTLSTL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCEEEEECCCHHHC GHNEVTAIVAHERAHLRARHDLVLEAFTAVHDAFPVIVRSKSALDAVKLLVELLADDAAV CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHH RTAGPTPLARALVACAGGPTPVGAMAAGGPTTLIRVRRLGGSGNSLLLSCSAYTAAAAIL CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHH VVPTLAVVIPWFTELQRLFSK HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SALAFAILALLLTGPVPALLARARWPYRAPRAAMVLWQAIAVAAVLSAFSSGLAIASRL HHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPGPDGHPTATITGEIDRLGWGLWLLYVTVFAITILIGVRLMVSVVRVGVRTRRRRARH CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAIVDLLDHKRYCENWRGGYDINRRRDHDLRVLEVDEPLAYCLPGVRSRVVVSEGTLSTL HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCEEEEECCCHHHC GHNEVTAIVAHERAHLRARHDLVLEAFTAVHDAFPVIVRSKSALDAVKLLVELLADDAAV CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHH RTAGPTPLARALVACAGGPTPVGAMAAGGPTTLIRVRRLGGSGNSLLLSCSAYTAAAAIL CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHH VVPTLAVVIPWFTELQRLFSK HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA