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The map label for this gene is ybeX [C]

Identifier: 169629497

GI number: 169629497

Start: 2470161

End: 2471522

Strand: Reverse

Name: ybeX [C]

Synonym: MAB_2411c

Alternate gene names: 169629497

Gene position: 2471522-2470161 (Counterclockwise)

Preceding gene: 169629498

Following gene: 169629496

Centisome position: 48.78

GC content: 66.96

Gene sequence:

>1362_bases
GTGACGGTCTTACTCACCGGGCTGAGCTTGCTTGCCTTCGTGGCCCTGACCGCCGGCACCGCCCTCTTCGTGGCGGCCGA
ATTCTCCTTGACCGCGCTGGAACGAAGCGGCATCGAGGCGCGTGCCAAGACCGGCGACAGCCGCGACCGGTTGGTCAAAC
GAGCGCACAGCACACTTTCTTTCCAGCTGTCCGGGGCCCAGCTCGGCATCACCATCACCACACTTGTCACCGGGTACCTC
GCCGAGCCGGTGATCGCGCGCCTGCTGTCACAACTGTTCGGATACACCGGGATTGCGGTCAGCAGCGCGATATCGCTGGC
GCTGGCGTTGATCATCGCCACGTCGATATCGATGATCTTCGGCGAATTGGTGCCCAAGAATTTCGCGCTGGCACGTCCGG
TCTGGACGTCGCGTGCCACCTCGGGCCCCATGGTGCTGTTCTCGGCGGTTTTCGCCTTCGCGATCCGGGCGCTGAACGGT
ACCGCCAACTGGGTGCTACGCCGCATGGGCATCGAACCCGCCGAGGAGCTGCGTTCGGCGCGCTCGCCGCAGGAATTGGG
GTCGCTGGTGCGCACCTCGGCACGCAGCGGCGCCCTCGATGAAACCACCGCGGTGTTGGTGGATCGGTCGCTGCGGTTCG
GCAGTCGCACCGCCGAGGAACTCATGACCCCACGCACCGAGATCGAATCGCTGGAAGCGACCGACACGGTGGCCGATCTG
GTCACCATCGCCGTCGAGACCGGCTTCTCGCGCTTCCCCATCACCGAGGGCGACCTGGACGCCACGATCGGCATCGTCCA
CGTCAAGCAGGTCTTCGAGGTGCCGCGGGATCGGCGCGCCACCACCACACTGGCCAGCCTGGCCCGGCCGGTGGCCGTGG
TGCCGTCCACGCTCGACGGTGACGCGGTCATGGAACAGGTGCGGGCCAACGGCATGCAGACCGCGCTGGTGGTCGACGAG
TACGGCGGCACCGCCGGACTGGTCACCGTGGAGGACATGATCGAGGAGATCGTGGGTGATGTACGGGACGAGCACGACGA
CGCGACTCCGGACGTGGTGTCGTCCGGCGGTGGCTGGGTGGTCTCGGGGCTGCTGCGCATCGATGAGGTGGCCGCGGCGA
CCGGTTACCGAGCTCCTGAGGGAGAGTACGAAACGATCGGCGGCCTGGTGCTGCAAGAACTCGGCCACATCCCTACGGTC
GGCGAGACCGTCGAATTGACGGCCGTGGTGCCGGACCATCCGCTGGCCGAGCTGCCGCGCTGGCGAGCCAGAGTGGCGGG
CATGGATGGGCGCCGAATCGATCAGATCGAGCTCACCGAGCTGACCGACGCCGACAGCCGGGGGAACAACGACGATGGGT
AG

Upstream 100 bases:

>100_bases
GGCACCCTGCCGACCATCTGCACGGTTACCATTGAGCCTCACGATGGTCACCGTGTTTGTTCGAGCGTGACCGCCCTAAG
CCTAAGGGGGCCAGCAAGCG

Downstream 100 bases:

>100_bases
CGACATACTCGGCGTATTACTCACCGCCGCATTGCTTTTGGCCAACGCGTTCTTTGTCGGTGCCGAATTCGCCCTGATCT
CCGCACGCCGGGACCGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTVLLTGLSLLAFVALTAGTALFVAAEFSLTALERSGIEARAKTGDSRDRLVKRAHSTLSFQLSGAQLGITITTLVTGYL
AEPVIARLLSQLFGYTGIAVSSAISLALALIIATSISMIFGELVPKNFALARPVWTSRATSGPMVLFSAVFAFAIRALNG
TANWVLRRMGIEPAEELRSARSPQELGSLVRTSARSGALDETTAVLVDRSLRFGSRTAEELMTPRTEIESLEATDTVADL
VTIAVETGFSRFPITEGDLDATIGIVHVKQVFEVPRDRRATTTLASLARPVAVVPSTLDGDAVMEQVRANGMQTALVVDE
YGGTAGLVTVEDMIEEIVGDVRDEHDDATPDVVSSGGGWVVSGLLRIDEVAAATGYRAPEGEYETIGGLVLQELGHIPTV
GETVELTAVVPDHPLAELPRWRARVAGMDGRRIDQIELTELTDADSRGNNDDG

Sequences:

>Translated_453_residues
MTVLLTGLSLLAFVALTAGTALFVAAEFSLTALERSGIEARAKTGDSRDRLVKRAHSTLSFQLSGAQLGITITTLVTGYL
AEPVIARLLSQLFGYTGIAVSSAISLALALIIATSISMIFGELVPKNFALARPVWTSRATSGPMVLFSAVFAFAIRALNG
TANWVLRRMGIEPAEELRSARSPQELGSLVRTSARSGALDETTAVLVDRSLRFGSRTAEELMTPRTEIESLEATDTVADL
VTIAVETGFSRFPITEGDLDATIGIVHVKQVFEVPRDRRATTTLASLARPVAVVPSTLDGDAVMEQVRANGMQTALVVDE
YGGTAGLVTVEDMIEEIVGDVRDEHDDATPDVVSSGGGWVVSGLLRIDEVAAATGYRAPEGEYETIGGLVLQELGHIPTV
GETVELTAVVPDHPLAELPRWRARVAGMDGRRIDQIELTELTDADSRGNNDDG
>Mature_452_residues
TVLLTGLSLLAFVALTAGTALFVAAEFSLTALERSGIEARAKTGDSRDRLVKRAHSTLSFQLSGAQLGITITTLVTGYLA
EPVIARLLSQLFGYTGIAVSSAISLALALIIATSISMIFGELVPKNFALARPVWTSRATSGPMVLFSAVFAFAIRALNGT
ANWVLRRMGIEPAEELRSARSPQELGSLVRTSARSGALDETTAVLVDRSLRFGSRTAEELMTPRTEIESLEATDTVADLV
TIAVETGFSRFPITEGDLDATIGIVHVKQVFEVPRDRRATTTLASLARPVAVVPSTLDGDAVMEQVRANGMQTALVVDEY
GGTAGLVTVEDMIEEIVGDVRDEHDDATPDVVSSGGGWVVSGLLRIDEVAAATGYRAPEGEYETIGGLVLQELGHIPTVG
ETVELTAVVPDHPLAELPRWRARVAGMDGRRIDQIELTELTDADSRGNNDDG

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=394, Percent_Identity=30.7106598984772, Blast_Score=191, Evalue=9e-49,
Organism=Escherichia coli, GI1786879, Length=261, Percent_Identity=29.5019157088123, Blast_Score=125, Evalue=6e-30,
Organism=Escherichia coli, GI1790664, Length=437, Percent_Identity=22.6544622425629, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI145693175, Length=393, Percent_Identity=23.9185750636132, Blast_Score=108, Evalue=8e-25,
Organism=Escherichia coli, GI1788119, Length=248, Percent_Identity=30.241935483871, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87082033, Length=332, Percent_Identity=27.4096385542169, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48159; Mature: 48028

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLLTGLSLLAFVALTAGTALFVAAEFSLTALERSGIEARAKTGDSRDRLVKRAHSTLS
CEEEHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHEE
FQLSGAQLGITITTLVTGYLAEPVIARLLSQLFGYTGIAVSSAISLALALIIATSISMIF
EEECCCEECEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
GELVPKNFALARPVWTSRATSGPMVLFSAVFAFAIRALNGTANWVLRRMGIEPAEELRSA
HHHCCCCCHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHC
RSPQELGSLVRTSARSGALDETTAVLVDRSLRFGSRTAEELMTPRTEIESLEATDTVADL
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHH
VTIAVETGFSRFPITEGDLDATIGIVHVKQVFEVPRDRRATTTLASLARPVAVVPSTLDG
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCH
DAVMEQVRANGMQTALVVDEYGGTAGLVTVEDMIEEIVGDVRDEHDDATPDVVSSGGGWV
HHHHHHHHHCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHH
VSGLLRIDEVAAATGYRAPEGEYETIGGLVLQELGHIPTVGETVELTAVVPDHPLAELPR
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHCCH
WRARVAGMDGRRIDQIELTELTDADSRGNNDDG
HHHHHCCCCCCCCCCEEEHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TVLLTGLSLLAFVALTAGTALFVAAEFSLTALERSGIEARAKTGDSRDRLVKRAHSTLS
EEEHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHEE
FQLSGAQLGITITTLVTGYLAEPVIARLLSQLFGYTGIAVSSAISLALALIIATSISMIF
EEECCCEECEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
GELVPKNFALARPVWTSRATSGPMVLFSAVFAFAIRALNGTANWVLRRMGIEPAEELRSA
HHHCCCCCHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHC
RSPQELGSLVRTSARSGALDETTAVLVDRSLRFGSRTAEELMTPRTEIESLEATDTVADL
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHH
VTIAVETGFSRFPITEGDLDATIGIVHVKQVFEVPRDRRATTTLASLARPVAVVPSTLDG
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCH
DAVMEQVRANGMQTALVVDEYGGTAGLVTVEDMIEEIVGDVRDEHDDATPDVVSSGGGWV
HHHHHHHHHCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHH
VSGLLRIDEVAAATGYRAPEGEYETIGGLVLQELGHIPTVGETVELTAVVPDHPLAELPR
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHCCH
WRARVAGMDGRRIDQIELTELTDADSRGNNDDG
HHHHHCCCCCCCCCCEEEHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]