| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629393
Identifier: 169629393
GI number: 169629393
Start: 2358432
End: 2358956
Strand: Reverse
Name: 169629393
Synonym: MAB_2307c
Alternate gene names: NA
Gene position: 2358956-2358432 (Counterclockwise)
Preceding gene: 169629395
Following gene: 169629392
Centisome position: 46.55
GC content: 62.1
Gene sequence:
>525_bases GTGCACCCGCCGAAACACGAGATCTTCGACCTGGCGGCACTGACCAACACCGACCCGAAGGGAATCGTTCGGTCGGTGGA TCAGTACCAGGTACGGCCGTGGGGACTGTACATGGCGCGGCCGACACCCGGGCGCGCGCAGTTTCACTATGTGGAGTCCT GGCTGGTTCCGGCACTAGGACTGCGCGCAAATATCTTTCATTTCAACCCGGGCCACGAGCGCGATCAGGACTACTACCTG GATATCGGGGAGTTCGTCGCCGGGCCATCGCGGTGGGTAGCCACCGACCACTATCTTGACCTGGTGGTGCGTGGCGGACG CGAAACCGAATTGGCTGATATCGACGAGCTTCTCGAAGCACACCAAGCGGGACTGTTAACCACCGCCACAGCAGAACTCG CCATTCGCCGGGCGGTTGCGGCCATCGACGGACTTGCCAAGCACGGGCATGACCTGAACGCTTGGCTCGCCGATGCCGGG ATGCCGTTGACCTGGCGCGACAGATGTGGAGATGCTCATGCCTGA
Upstream 100 bases:
>100_bases CGCAACGATGGGGTGTTCTGTTGCGAAAGCCATGGCCCCAGGGTAAGCCGAGGGTCTGACATCCCTCCAATACCAGCGAG GAAGGCGGCAGAAAACCACC
Downstream 100 bases:
>100_bases GTCCATTCGCTGGGGAATCGTCGGACCCGGTCGTATCGCCGGCAATGTGGCCCGCGATTTCCCCCTCACGCCCCGAGCCG AGCTGGCAGCCGTGGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MHPPKHEIFDLAALTNTDPKGIVRSVDQYQVRPWGLYMARPTPGRAQFHYVESWLVPALGLRANIFHFNPGHERDQDYYL DIGEFVAGPSRWVATDHYLDLVVRGGRETELADIDELLEAHQAGLLTTATAELAIRRAVAAIDGLAKHGHDLNAWLADAG MPLTWRDRCGDAHA
Sequences:
>Translated_174_residues MHPPKHEIFDLAALTNTDPKGIVRSVDQYQVRPWGLYMARPTPGRAQFHYVESWLVPALGLRANIFHFNPGHERDQDYYL DIGEFVAGPSRWVATDHYLDLVVRGGRETELADIDELLEAHQAGLLTTATAELAIRRAVAAIDGLAKHGHDLNAWLADAG MPLTWRDRCGDAHA >Mature_174_residues MHPPKHEIFDLAALTNTDPKGIVRSVDQYQVRPWGLYMARPTPGRAQFHYVESWLVPALGLRANIFHFNPGHERDQDYYL DIGEFVAGPSRWVATDHYLDLVVRGGRETELADIDELLEAHQAGLLTTATAELAIRRAVAAIDGLAKHGHDLNAWLADAG MPLTWRDRCGDAHA
Specific function: Unknown
COG id: COG2306
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19442; Mature: 19442
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPPKHEIFDLAALTNTDPKGIVRSVDQYQVRPWGLYMARPTPGRAQFHYVESWLVPALG CCCCCCHHEEHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC LRANIFHFNPGHERDQDYYLDIGEFVAGPSRWVATDHYLDLVVRGGRETELADIDELLEA CEEEEEEECCCCCCCCCEEEEHHHHHCCCCCEEEHHHHEEEEEECCCCCCHHHHHHHHHH HQAGLLTTATAELAIRRAVAAIDGLAKHGHDLNAWLADAGMPLTWRDRCGDAHA HHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEHHCCCCCCC >Mature Secondary Structure MHPPKHEIFDLAALTNTDPKGIVRSVDQYQVRPWGLYMARPTPGRAQFHYVESWLVPALG CCCCCCHHEEHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC LRANIFHFNPGHERDQDYYLDIGEFVAGPSRWVATDHYLDLVVRGGRETELADIDELLEA CEEEEEEECCCCCCCCCEEEEHHHHHCCCCCEEEHHHHEEEEEECCCCCCHHHHHHHHHH HQAGLLTTATAELAIRRAVAAIDGLAKHGHDLNAWLADAGMPLTWRDRCGDAHA HHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA