| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169629391
Identifier: 169629391
GI number: 169629391
Start: 2356988
End: 2357398
Strand: Reverse
Name: 169629391
Synonym: MAB_2305c
Alternate gene names: NA
Gene position: 2357398-2356988 (Counterclockwise)
Preceding gene: 169629392
Following gene: 169629390
Centisome position: 46.52
GC content: 61.07
Gene sequence:
>411_bases ATGCGCCCCCTCACCAGAGGGCTTGGCACTGTCGGAGTGGCGGCGGTATCCCTCGCCGTTCTGGCAGCACCAGCCTCCGC AGCCGAGCTACACAACATCAGTTACATCGCTCGTGTCGATGGACTTGGCCGCGGTATCTCCGTGACATTCAAAACCGATC CGGTGGATCGACGCACCGAGCAACCTCGTCTCGGACCCGGTGAGAGCTGGGAAGTCAACCTGGTGATGGAAGACCCGCAG CAAGCCGGGATGACTGTCCGGGTGCTGCCGCCCTATGGCGTTGGATTGCACTGCGAGATACAGGTCGACGATGTGGTGGT CGACTCTCAGGATCTGACTGTGCCCCCGGCGCTCGGGATCTTCAACGGCCCTGTCAATGACACCGTCACCTGCGGTCATT TCAACTCGTAA
Upstream 100 bases:
>100_bases CACAGCCTGCGAACAACTCGGAGTTGACCACACCGAAGACCCCGCTGACCTGGACTAATCACGTTGCCGCGGCCTGGCGG GCCCCGGTAGGATTCGCGGT
Downstream 100 bases:
>100_bases TCACGAGTCAAATCAGTCACTTCCGTACCCCGGACCTGCACGAGAACCGCTACAATAGCGCCATGCGCCTGAACTCTATT CGTGCTTATTTTCGTGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MRPLTRGLGTVGVAAVSLAVLAAPASAAELHNISYIARVDGLGRGISVTFKTDPVDRRTEQPRLGPGESWEVNLVMEDPQ QAGMTVRVLPPYGVGLHCEIQVDDVVVDSQDLTVPPALGIFNGPVNDTVTCGHFNS
Sequences:
>Translated_136_residues MRPLTRGLGTVGVAAVSLAVLAAPASAAELHNISYIARVDGLGRGISVTFKTDPVDRRTEQPRLGPGESWEVNLVMEDPQ QAGMTVRVLPPYGVGLHCEIQVDDVVVDSQDLTVPPALGIFNGPVNDTVTCGHFNS >Mature_136_residues MRPLTRGLGTVGVAAVSLAVLAAPASAAELHNISYIARVDGLGRGISVTFKTDPVDRRTEQPRLGPGESWEVNLVMEDPQ QAGMTVRVLPPYGVGLHCEIQVDDVVVDSQDLTVPPALGIFNGPVNDTVTCGHFNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14359; Mature: 14359
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLTRGLGTVGVAAVSLAVLAAPASAAELHNISYIARVDGLGRGISVTFKTDPVDRRTE CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCCCEEEEEECCCCCCCCC QPRLGPGESWEVNLVMEDPQQAGMTVRVLPPYGVGLHCEIQVDDVVVDSQDLTVPPALGI CCCCCCCCCEEEEEEEECCHHCCCEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCE FNGPVNDTVTCGHFNS ECCCCCCCEEECCCCC >Mature Secondary Structure MRPLTRGLGTVGVAAVSLAVLAAPASAAELHNISYIARVDGLGRGISVTFKTDPVDRRTE CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCCCEEEEEECCCCCCCCC QPRLGPGESWEVNLVMEDPQQAGMTVRVLPPYGVGLHCEIQVDDVVVDSQDLTVPPALGI CCCCCCCCCEEEEEEEECCHHCCCEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCE FNGPVNDTVTCGHFNS ECCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA