| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629390
Identifier: 169629390
GI number: 169629390
Start: 2356449
End: 2356925
Strand: Reverse
Name: 169629390
Synonym: MAB_2304c
Alternate gene names: NA
Gene position: 2356925-2356449 (Counterclockwise)
Preceding gene: 169629391
Following gene: 169629385
Centisome position: 46.51
GC content: 56.6
Gene sequence:
>477_bases ATGCGCCTGAACTCTATTCGTGCTTATTTTCGTGGTCCCGCCCGCAGCGCGGGAATTGCGATAGTCACCGCGGGAATTGC CGCGAGCACATTTCCCGCCATTGCCTCCGCAGATTCCACCGATGATTACCCGGTTCCCCGGCGAATGCTGAAGACCACGT GTACTGCCGAGCAATATCTGGCCGCGGTTCGCGATTATGACCCGATCTATTACACGCGGTACATGATCGACAAGAACAAC AAGCCGCAGCAAGTGCAGGACGCGACGATCGATCGTATTCACCAATTCTTCGCCAAGGATTATGCGGGGCGTCGGGAAGA GTCTGAGGTCTTCGCGGTGAACTACCCGCCCGAGGCTCTGACATCCCAGTGGCCCAACTGGGGCAAGATCTTCTTCAACA ACAAGGGTGTCGTTGCCAAGGGCACCGAGAATTGCAGCAAGTACCCTTCCGACATGTCAGTCTGGGACGGTCCCTAA
Upstream 100 bases:
>100_bases TCAATGACACCGTCACCTGCGGTCATTTCAACTCGTAATCACGAGTCAAATCAGTCACTTCCGTACCCCGGACCTGCACG AGAACCGCTACAATAGCGCC
Downstream 100 bases:
>100_bases ACACACAAGCGCGCAGAAAAAGCCCCGTGGTCATCACGCCGCGGGGCTTTTTCTTATACCTGTTCTTATGCCTGCCAATT GTCTGGATTCCCGTAGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRLNSIRAYFRGPARSAGIAIVTAGIAASTFPAIASADSTDDYPVPRRMLKTTCTAEQYLAAVRDYDPIYYTRYMIDKNN KPQQVQDATIDRIHQFFAKDYAGRREESEVFAVNYPPEALTSQWPNWGKIFFNNKGVVAKGTENCSKYPSDMSVWDGP
Sequences:
>Translated_158_residues MRLNSIRAYFRGPARSAGIAIVTAGIAASTFPAIASADSTDDYPVPRRMLKTTCTAEQYLAAVRDYDPIYYTRYMIDKNN KPQQVQDATIDRIHQFFAKDYAGRREESEVFAVNYPPEALTSQWPNWGKIFFNNKGVVAKGTENCSKYPSDMSVWDGP >Mature_158_residues MRLNSIRAYFRGPARSAGIAIVTAGIAASTFPAIASADSTDDYPVPRRMLKTTCTAEQYLAAVRDYDPIYYTRYMIDKNN KPQQVQDATIDRIHQFFAKDYAGRREESEVFAVNYPPEALTSQWPNWGKIFFNNKGVVAKGTENCSKYPSDMSVWDGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17806; Mature: 17806
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLNSIRAYFRGPARSAGIAIVTAGIAASTFPAIASADSTDDYPVPRRMLKTTCTAEQYL CCCCHHHHHHCCCCCCCCEEEEECCCHHHHCCHHCCCCCCCCCCHHHHHHHHHCCHHHHH AAVRDYDPIYYTRYMIDKNNKPQQVQDATIDRIHQFFAKDYAGRREESEVFAVNYPPEAL HHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHH TSQWPNWGKIFFNNKGVVAKGTENCSKYPSDMSVWDGP HHCCCCCCEEEECCCCEEEECCCHHHCCCCCCCCCCCC >Mature Secondary Structure MRLNSIRAYFRGPARSAGIAIVTAGIAASTFPAIASADSTDDYPVPRRMLKTTCTAEQYL CCCCHHHHHHCCCCCCCCEEEEECCCHHHHCCHHCCCCCCCCCCHHHHHHHHHCCHHHHH AAVRDYDPIYYTRYMIDKNNKPQQVQDATIDRIHQFFAKDYAGRREESEVFAVNYPPEAL HHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHH TSQWPNWGKIFFNNKGVVAKGTENCSKYPSDMSVWDGP HHCCCCCCEEEECCCCEEEECCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA