| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629311
Identifier: 169629311
GI number: 169629311
Start: 2247564
End: 2248949
Strand: Reverse
Name: 169629311
Synonym: MAB_2225c
Alternate gene names: NA
Gene position: 2248949-2247564 (Counterclockwise)
Preceding gene: 169629312
Following gene: 169629310
Centisome position: 44.38
GC content: 66.74
Gene sequence:
>1386_bases ATGACACATTTTATCCGCGATGCGCCGCGCGCGCGAAGAGCATTGGGCGGTGTCGTCGCCGCAACGCTACTGGCGCTGTC CCCCGTGGCAGCCCCTGTTGCCGGCGCAGTGATTCAGCCGGAAGCAGATCCCGCCGCGTTGCCCAAGGATTCGTCCCCCA GCGCAACCGCGGGCATGCAATCGTCCGCGTGCAGCACCACGGTGTTACTGCCCGGCACGGGCACCAGCGGCAAGCCGTCG CCAGAGTTCGAGGAGGCGTGGCGCTTTTCTCGCGGTGAGGGGCAGAGCGTCGCGATCATCGACACCGGCGTCAAACCCAG TGCGCGACTGCACGTCGAACCCGGGGGCGATTATGTCCAGTCAACGGATGGGCTCACCGACTGCGACGGGCACGGAACCA TGGTGGCCGGAATCATCGGTGCCCAGCCCGGGCCCGATGGATTCTCCGGTATCGCGCCCGCCGCCAAACTGATCTCGATC CGCCAGGAGTCCTCCAAGTTCTCCCCACGACTCACCGCGGGAGGCGATCCGTCCACAAACGCCGCTACCCAGTACGTCAA TACCCTGGCACGGTCCATCGTGCATGCCGCAAACCTCGGCGCCCGCGTGATCAACATTTCTTCGGCCGAGTGCGTTCCGG CGGCCAAGCCCATTGACCAAGCCGCGCTTGGGGCGGCGTTGCGCTATGCGGTCGCCGAAAAGGACGCGGTCGTCGTGGCC GCCGCGGGCAACACCAGCGGCGGCAGCGCCAACTGCCAACAGAATCCGTTGACCGGTTCGGGCGCCGACCCACGGAATTG GTCTGGGGTGGAGTCGGTATCGGTGCCATCCTGGTGGCAGCCGTACGTGCTGTCGGTGGGTTCGGTGGGTATCGACGGAA GCCCGTCGAAGTTCACCATGGCCGGGCCCTGGGTGGGCATTGCGGCAAATGGCGAGAACGTGACCTCGCTGTCCAACGAC GCTGAGGGCGGTTTGGCCAACGGCATGATTGGCCAGAACGGAAAGCCGGTGCCCCTCTTCGGGACCAGCTATGCGACAGC ATACGTAGCGGGTGTGGCTGCGCTGGTACGTAGCCGCTATCCCGAATTGACTGCACCGCAGGTTATTTCGCGGCTGCAAA GAACAGCCCGAGACGCGGGCCGATCGCCGTCCAATCTGGTGGGAGCCGGAACGGTGGACCCGGTGGCCGCGCTTACCTGG GAGGTCCCCGCGGACGGGAACGCATCTAGTGGCCCGGGCGCCCGTGCGGTCGTCCCCCCGCCCCCTCCCACCCCGGAAAA TCCACTTCCCCGGCGGCTCGCCTTCCTGGGCGCCGGTGTATGCCTGATCGCGGTGGTCGTCGTCGCCGCGCTCAGCGCGC GTCGCAGACAGGAGAGCACTGAGTGA
Upstream 100 bases:
>100_bases CCAGCCGTCGGCTCCTCGGATTCCTCGCCTCGGGTATCGACGCCTCGCTGCTGCCGGTCATCGCGTACCTCACCGGACTG TTCAGCTGGATCCTCAACCG
Downstream 100 bases:
>100_bases GTACCCATGCGAGTAAGAAGTTCACGTTTTATCGACCACCCGTGCCTGGAACGCTGCGGCTGACACTGATCGCCACGCTG GTTGCCGCGGGTGCTTTCGC
Product: peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTHFIRDAPRARRALGGVVAATLLALSPVAAPVAGAVIQPEADPAALPKDSSPSATAGMQSSACSTTVLLPGTGTSGKPS PEFEEAWRFSRGEGQSVAIIDTGVKPSARLHVEPGGDYVQSTDGLTDCDGHGTMVAGIIGAQPGPDGFSGIAPAAKLISI RQESSKFSPRLTAGGDPSTNAATQYVNTLARSIVHAANLGARVINISSAECVPAAKPIDQAALGAALRYAVAEKDAVVVA AAGNTSGGSANCQQNPLTGSGADPRNWSGVESVSVPSWWQPYVLSVGSVGIDGSPSKFTMAGPWVGIAANGENVTSLSND AEGGLANGMIGQNGKPVPLFGTSYATAYVAGVAALVRSRYPELTAPQVISRLQRTARDAGRSPSNLVGAGTVDPVAALTW EVPADGNASSGPGARAVVPPPPPTPENPLPRRLAFLGAGVCLIAVVVVAALSARRRQESTE
Sequences:
>Translated_461_residues MTHFIRDAPRARRALGGVVAATLLALSPVAAPVAGAVIQPEADPAALPKDSSPSATAGMQSSACSTTVLLPGTGTSGKPS PEFEEAWRFSRGEGQSVAIIDTGVKPSARLHVEPGGDYVQSTDGLTDCDGHGTMVAGIIGAQPGPDGFSGIAPAAKLISI RQESSKFSPRLTAGGDPSTNAATQYVNTLARSIVHAANLGARVINISSAECVPAAKPIDQAALGAALRYAVAEKDAVVVA AAGNTSGGSANCQQNPLTGSGADPRNWSGVESVSVPSWWQPYVLSVGSVGIDGSPSKFTMAGPWVGIAANGENVTSLSND AEGGLANGMIGQNGKPVPLFGTSYATAYVAGVAALVRSRYPELTAPQVISRLQRTARDAGRSPSNLVGAGTVDPVAALTW EVPADGNASSGPGARAVVPPPPPTPENPLPRRLAFLGAGVCLIAVVVVAALSARRRQESTE >Mature_460_residues THFIRDAPRARRALGGVVAATLLALSPVAAPVAGAVIQPEADPAALPKDSSPSATAGMQSSACSTTVLLPGTGTSGKPSP EFEEAWRFSRGEGQSVAIIDTGVKPSARLHVEPGGDYVQSTDGLTDCDGHGTMVAGIIGAQPGPDGFSGIAPAAKLISIR QESSKFSPRLTAGGDPSTNAATQYVNTLARSIVHAANLGARVINISSAECVPAAKPIDQAALGAALRYAVAEKDAVVVAA AGNTSGGSANCQQNPLTGSGADPRNWSGVESVSVPSWWQPYVLSVGSVGIDGSPSKFTMAGPWVGIAANGENVTSLSNDA EGGLANGMIGQNGKPVPLFGTSYATAYVAGVAALVRSRYPELTAPQVISRLQRTARDAGRSPSNLVGAGTVDPVAALTWE VPADGNASSGPGARAVVPPPPPTPENPLPRRLAFLGAGVCLIAVVVVAALSARRRQESTE
Specific function: Shows keratinolytic activity [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 46513; Mature: 46381
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00137 SUBTILASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHFIRDAPRARRALGGVVAATLLALSPVAAPVAGAVIQPEADPAALPKDSSPSATAGMQ CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCHHCCCC SSACSTTVLLPGTGTSGKPSPEFEEAWRFSRGEGQSVAIIDTGVKPSARLHVEPGGDYVQ CCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCEEE STDGLTDCDGHGTMVAGIIGAQPGPDGFSGIAPAAKLISIRQESSKFSPRLTAGGDPSTN CCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCH AATQYVNTLARSIVHAANLGARVINISSAECVPAAKPIDQAALGAALRYAVAEKDAVVVA HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE AAGNTSGGSANCQQNPLTGSGADPRNWSGVESVSVPSWWQPYVLSVGSVGIDGSPSKFTM ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEE AGPWVGIAANGENVTSLSNDAEGGLANGMIGQNGKPVPLFGTSYATAYVAGVAALVRSRY CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCC PELTAPQVISRLQRTARDAGRSPSNLVGAGTVDPVAALTWEVPADGNASSGPGARAVVPP CCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCEEECCC PPPTPENPLPRRLAFLGAGVCLIAVVVVAALSARRRQESTE CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure THFIRDAPRARRALGGVVAATLLALSPVAAPVAGAVIQPEADPAALPKDSSPSATAGMQ CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCHHCCCC SSACSTTVLLPGTGTSGKPSPEFEEAWRFSRGEGQSVAIIDTGVKPSARLHVEPGGDYVQ CCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCEEE STDGLTDCDGHGTMVAGIIGAQPGPDGFSGIAPAAKLISIRQESSKFSPRLTAGGDPSTN CCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCH AATQYVNTLARSIVHAANLGARVINISSAECVPAAKPIDQAALGAALRYAVAEKDAVVVA HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE AAGNTSGGSANCQQNPLTGSGADPRNWSGVESVSVPSWWQPYVLSVGSVGIDGSPSKFTM ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEE AGPWVGIAANGENVTSLSNDAEGGLANGMIGQNGKPVPLFGTSYATAYVAGVAALVRSRY CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCC PELTAPQVISRLQRTARDAGRSPSNLVGAGTVDPVAALTWEVPADGNASSGPGARAVVPP CCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCEEECCC PPPTPENPLPRRLAFLGAGVCLIAVVVVAALSARRRQESTE CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1369007; 11058132; 1370008 [H]