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The map label for this gene is pup

Identifier: 169629257

GI number: 169629257

Start: 2186478

End: 2186672

Strand: Direct

Name: pup

Synonym: MAB_2171

Alternate gene names: 169629257

Gene position: 2186478-2186672 (Clockwise)

Preceding gene: 169629256

Following gene: 169629258

Centisome position: 43.15

GC content: 63.08

Gene sequence:

>195_bases
ATGGCGCAGGAACAGACCAAGCGCGGTGGTGGCGGAGACGATGACGACGTCACCGACCTGGGAGGACCCGCAGGGCAGGA
GCGCCGAGAAAAGCTGGCGGAGGACACTGACGATCTGCTCGATGAGATCGACGATGTGCTGGAAGAGAACGCCGAGGACT
TCGTGCGGGCGTACGTCCAAAAGGGTGGCCAGTGA

Upstream 100 bases:

>100_bases
CACCACGTAACCAGTTGGGCGACGCACACTTGTGAAACGTCACCTCGTCGGCGTTGCCCGGTAGGCTGAACAGAACCGAC
CTATGAGTCAGGAGGCAGCG

Downstream 100 bases:

>100_bases
TCTGGCGCGACGACGCGATCGCCAGCCAGCCCGCCGGACAGCACTTCCGCAATTCGCACCTTTCCTCGTTCTCGGAGTAT
CTGAGGGCCCAGGCCCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterial ubiquitin-like modifier

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MAQEQTKRGGGGDDDDVTDLGGPAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQKGGQ

Sequences:

>Translated_64_residues
MAQEQTKRGGGGDDDDVTDLGGPAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQKGGQ
>Mature_63_residues
AQEQTKRGGGGDDDDVTDLGGPAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQKGGQ

Specific function: Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic ubiquitin-like protein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PUP_MYCA9 (B1MAI1)

Other databases:

- EMBL:   CU458896
- RefSeq:   YP_001702906.1
- EnsemblBacteria:   EBMYCT00000004230
- GeneID:   5964684
- GenomeReviews:   CU458896_GR
- KEGG:   mab:MAB_2171
- GeneTree:   EBGT00050000017651
- HOGENOM:   HBG700099
- OMA:   MAQERIE
- ProtClustDB:   CLSK872009
- BioCyc:   MABS561007:MAB_2171-MONOMER
- HAMAP:   MF_02106
- InterPro:   IPR008515
- TIGRFAMs:   TIGR03687

Pfam domain/function: PF05639 DUF797

EC number: NA

Molecular weight: Translated: 6982; Mature: 6851

Theoretical pI: Translated: 3.75; Mature: 3.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEQTKRGGGGDDDDVTDLGGPAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ
CCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
KGGQ
HCCC
>Mature Secondary Structure 
AQEQTKRGGGGDDDDVTDLGGPAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ
CCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
KGGQ
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA