Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629235
Identifier: 169629235
GI number: 169629235
Start: 2163003
End: 2163656
Strand: Direct
Name: 169629235
Synonym: MAB_2149
Alternate gene names: NA
Gene position: 2163003-2163656 (Clockwise)
Preceding gene: 169629234
Following gene: 169629238
Centisome position: 42.69
GC content: 65.29
Gene sequence:
>654_bases GTGACCACGTACGTAGCGGCCCCGGCAATGACGCAAGCGGGCCCGAGCGATGACCTGACGCTGGTGCCCGCACGAAAACC GGCTCGCTCGCTGACCGGCTTTCTGTCGATGACCGGGGGCGTGCTCGTTGCCGCCCTGACTCGCCCGCCCGCAGTGCGCG AGTTCTTTCGGCAAGCGGGCGCGATAGCCAGAGTCTCGGTGCTGCCGATGTGCATGGTGGCGATACCGTTGGCGGTACTG ATCGTGCTTGTGCTCGAGGCCTTGGTGTTCGGTCCGACGGGTTTCCCCACCCATGCTGTCCTGGTGGCCGCGGCCGCAGG CGCGACAGTGGTATTCGCCGAGGCCGATTCGGCGCGGATTCAACGGGACATTGGTGCGATGCGCAGCAGAGGTATCGATA TCACGCACGGGTTTGTCGTGCCGCGTGTGCTCGCCACCGCGGTTGCGGCGGTGCCGTTGGCGTTCATAGCCGTTGCGGCG GCGGGCGTCTACTTCTTCTCGGCCTTCGGTAAGCACACCCCGCTGAGCCTTTTCATCGGGAACCTGTTGCAGCTGATGAG CCCGCTGAACATTCTGATTGTGGTGATCGAGGCCGCGAGCCTTGGGCTGATCGCGGGTCTCATCGCCTGCTATCGGGGCG CCACCGCGACATAG
Upstream 100 bases:
>100_bases GCGATGGCCAGGTTCCCAGCTAATCGGCTGTTTCGCGCTGCCCCGGGCGATCTTGCGCATTCTCCCGCGCAGACGGGCTG AACGCGATATGTAGAGAGAT
Downstream 100 bases:
>100_bases CGGCTACCGTGCGGTCAACAGGGTCGCCAGGCGGAACGCGGGCGCCACCAAACCGGCTGCGCGTAGTCCGATCTTCTGCA GGCTGCGGCTGCGCACCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTTYVAAPAMTQAGPSDDLTLVPARKPARSLTGFLSMTGGVLVAALTRPPAVREFFRQAGAIARVSVLPMCMVAIPLAVL IVLVLEALVFGPTGFPTHAVLVAAAAGATVVFAEADSARIQRDIGAMRSRGIDITHGFVVPRVLATAVAAVPLAFIAVAA AGVYFFSAFGKHTPLSLFIGNLLQLMSPLNILIVVIEAASLGLIAGLIACYRGATAT
Sequences:
>Translated_217_residues MTTYVAAPAMTQAGPSDDLTLVPARKPARSLTGFLSMTGGVLVAALTRPPAVREFFRQAGAIARVSVLPMCMVAIPLAVL IVLVLEALVFGPTGFPTHAVLVAAAAGATVVFAEADSARIQRDIGAMRSRGIDITHGFVVPRVLATAVAAVPLAFIAVAA AGVYFFSAFGKHTPLSLFIGNLLQLMSPLNILIVVIEAASLGLIAGLIACYRGATAT >Mature_216_residues TTYVAAPAMTQAGPSDDLTLVPARKPARSLTGFLSMTGGVLVAALTRPPAVREFFRQAGAIARVSVLPMCMVAIPLAVLI VLVLEALVFGPTGFPTHAVLVAAAAGATVVFAEADSARIQRDIGAMRSRGIDITHGFVVPRVLATAVAAVPLAFIAVAAA GVYFFSAFGKHTPLSLFIGNLLQLMSPLNILIVVIEAASLGLIAGLIACYRGATAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22296; Mature: 22165
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYVAAPAMTQAGPSDDLTLVPARKPARSLTGFLSMTGGVLVAALTRPPAVREFFRQAG CCCEECCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC AIARVSVLPMCMVAIPLAVLIVLVLEALVFGPTGFPTHAVLVAAAAGATVVFAEADSARI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCHHHH QRDIGAMRSRGIDITHGFVVPRVLATAVAAVPLAFIAVAAAGVYFFSAFGKHTPLSLFIG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH NLLQLMSPLNILIVVIEAASLGLIAGLIACYRGATAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTYVAAPAMTQAGPSDDLTLVPARKPARSLTGFLSMTGGVLVAALTRPPAVREFFRQAG CCEECCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC AIARVSVLPMCMVAIPLAVLIVLVLEALVFGPTGFPTHAVLVAAAAGATVVFAEADSARI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCHHHH QRDIGAMRSRGIDITHGFVVPRVLATAVAAVPLAFIAVAAAGVYFFSAFGKHTPLSLFIG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH NLLQLMSPLNILIVVIEAASLGLIAGLIACYRGATAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA