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The map label for this gene is desA3 [H]

Identifier: 169629234

GI number: 169629234

Start: 2161648

End: 2162892

Strand: Direct

Name: desA3 [H]

Synonym: MAB_2148

Alternate gene names: 169629234

Gene position: 2161648-2162892 (Clockwise)

Preceding gene: 169629233

Following gene: 169629235

Centisome position: 42.66

GC content: 61.29

Gene sequence:

>1245_bases
ATGGCAATCACGGACATCTCGGCATTCGCGCATCTCACCAGCGAGGACGTCGAGAACCTGGCCGTCGAGCTCGATGGGCT
GCGACGTGAGATCGAGGAGTCGCGCGGTGCGCGCGACGCCCGGTATATCCGGCGTACCATCGCCGCGCAGCGCGCCCTTG
AGTTGGGTGGCCGCGTATTGCTCGCCGCGAGCACCAAGCGCGCCGCATGGTGGGCCGGAACGGTCACATTGGCCGTCGCC
AAGATCATTGAGAATATGGAGATCGGGCACAACGTCCTGCACGGTCAGTGGGACTGGATGAACGATCCCGAGATTCACTC
CTCGACATGGGAGTGGGACATGGCAGGCGCCGCCAAACACTGGCGTATCACGCACAACGTCGAGCATCACAAGTACACCA
ACATTCTCGATCTGGATGACGACGTCGGCTACGGGCTGCTGCGCGTCACCCGCGATGAATCGTGGAAGATTCGCAACCTG
TTCAACATCCCCTTCAATTTCATGCTGGCAGCCGGCTTTGAATGGGGAATTGCCTTGCAGCACCTGGAACTTCGCAAGAT
CTGGAAGAAGGAGACACGCGAGGCCACCAAGCAGCGACTGCGTGAGCTGGTTCGGTCGGCGGCCTCGCAGCTCTTCAAGG
ACTACGTGGCATTCCCGGCGATCACCGCAGCATCACCCGGAGCCACCTACCGGTCCACACTGACCGCCAATGCGACGGCC
AATTTGCTGCGGAACTTCTGGTCGAATGCCGTGATCTTTTGCGGACATTTCCCTGACGGGGCCGAGAAGTTCACCGTGAC
GGACATGGAGAACGAGACACGGGGTCAGTGGTACCTGCGTCAGCTGCTGGGCAGCGCGAACTTCAACGCCGGACCGACGA
TGCGACTGATGAGTGGCAACCTGTGTCATCAGATCGAGCACCACATCTACCCGGATCTGCCGAGCAACCGGCTGCACGAG
ATCTCGGTGCGGGTGCGGGAGATCTGCGAGCGTTACGACCTGCCCTACACCACCGGGTCGATGTTGTTCCAGTACGCGAA
GACATGGCGCACCATCGCCAAACTCTCACTGCCGGACCGGTTTTTGCACGCTACTGCGGATAACGCGCCGGAAACCCGCA
GTGAGCGGATGTTCGTGGTCCTGGAACAACCTCAGGTGCCGGGGGTGGAGTCGGTTCCGCGGCGCGGACTCAAGACCGCG
ATCGCCATGGTTCGTGAACGCCGCCGCAACAAGGTGGCCGTCTAA

Upstream 100 bases:

>100_bases
ATACCGTGGCCTGGTTGTCACCGCCTGTGGCGTGTCCATTTACCGACGAGTAACCTACGGGACCGTAGGGTAAAGGTATC
GTGGGCGCGAAAGGAGGCCG

Downstream 100 bases:

>100_bases
CCGCGGACCGGCGATGGCCAGGTTCCCAGCTAATCGGCTGTTTCGCGCTGCCCCGGGCGATCTTGCGCATTCTCCCGCGC
AGACGGGCTGAACGCGATAT

Product: putative linoleoyl-CoA desaturase

Products: NA

Alternate protein names: Delta(9)-desaturase; Stearoyl-CoA desaturase [H]

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MAITDISAFAHLTSEDVENLAVELDGLRREIEESRGARDARYIRRTIAAQRALELGGRVLLAASTKRAAWWAGTVTLAVA
KIIENMEIGHNVLHGQWDWMNDPEIHSSTWEWDMAGAAKHWRITHNVEHHKYTNILDLDDDVGYGLLRVTRDESWKIRNL
FNIPFNFMLAAGFEWGIALQHLELRKIWKKETREATKQRLRELVRSAASQLFKDYVAFPAITAASPGATYRSTLTANATA
NLLRNFWSNAVIFCGHFPDGAEKFTVTDMENETRGQWYLRQLLGSANFNAGPTMRLMSGNLCHQIEHHIYPDLPSNRLHE
ISVRVREICERYDLPYTTGSMLFQYAKTWRTIAKLSLPDRFLHATADNAPETRSERMFVVLEQPQVPGVESVPRRGLKTA
IAMVRERRRNKVAV

Sequences:

>Translated_414_residues
MAITDISAFAHLTSEDVENLAVELDGLRREIEESRGARDARYIRRTIAAQRALELGGRVLLAASTKRAAWWAGTVTLAVA
KIIENMEIGHNVLHGQWDWMNDPEIHSSTWEWDMAGAAKHWRITHNVEHHKYTNILDLDDDVGYGLLRVTRDESWKIRNL
FNIPFNFMLAAGFEWGIALQHLELRKIWKKETREATKQRLRELVRSAASQLFKDYVAFPAITAASPGATYRSTLTANATA
NLLRNFWSNAVIFCGHFPDGAEKFTVTDMENETRGQWYLRQLLGSANFNAGPTMRLMSGNLCHQIEHHIYPDLPSNRLHE
ISVRVREICERYDLPYTTGSMLFQYAKTWRTIAKLSLPDRFLHATADNAPETRSERMFVVLEQPQVPGVESVPRRGLKTA
IAMVRERRRNKVAV
>Mature_413_residues
AITDISAFAHLTSEDVENLAVELDGLRREIEESRGARDARYIRRTIAAQRALELGGRVLLAASTKRAAWWAGTVTLAVAK
IIENMEIGHNVLHGQWDWMNDPEIHSSTWEWDMAGAAKHWRITHNVEHHKYTNILDLDDDVGYGLLRVTRDESWKIRNLF
NIPFNFMLAAGFEWGIALQHLELRKIWKKETREATKQRLRELVRSAASQLFKDYVAFPAITAASPGATYRSTLTANATAN
LLRNFWSNAVIFCGHFPDGAEKFTVTDMENETRGQWYLRQLLGSANFNAGPTMRLMSGNLCHQIEHHIYPDLPSNRLHEI
SVRVREICERYDLPYTTGSMLFQYAKTWRTIAKLSLPDRFLHATADNAPETRSERMFVVLEQPQVPGVESVPRRGLKTAI
AMVRERRRNKVAV

Specific function: Desaturates stearoyl-CoA to form oleoyl-CoA [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable). Note=Has been shown to be membrane-associated but no reliable trans-membrane regions are predicted by bioinformatics tools [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 47380; Mature: 47248

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITDISAFAHLTSEDVENLAVELDGLRREIEESRGARDARYIRRTIAAQRALELGGRVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEE
LAASTKRAAWWAGTVTLAVAKIIENMEIGHNVLHGQWDWMNDPEIHSSTWEWDMAGAAKH
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
WRITHNVEHHKYTNILDLDDDVGYGLLRVTRDESWKIRNLFNIPFNFMLAAGFEWGIALQ
EEEECCCCHHCCCCEEECCCCCCCCEEEEECCCCEEEEHEECCCHHHHHHCCCHHHHHHH
HLELRKIWKKETREATKQRLRELVRSAASQLFKDYVAFPAITAASPGATYRSTLTANATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECHHHH
NLLRNFWSNAVIFCGHFPDGAEKFTVTDMENETRGQWYLRQLLGSANFNAGPTMRLMSGN
HHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCC
LCHQIEHHIYPDLPSNRLHEISVRVREICERYDLPYTTGSMLFQYAKTWRTIAKLSLPDR
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
FLHATADNAPETRSERMFVVLEQPQVPGVESVPRRGLKTAIAMVRERRRNKVAV
HHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AITDISAFAHLTSEDVENLAVELDGLRREIEESRGARDARYIRRTIAAQRALELGGRVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEE
LAASTKRAAWWAGTVTLAVAKIIENMEIGHNVLHGQWDWMNDPEIHSSTWEWDMAGAAKH
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
WRITHNVEHHKYTNILDLDDDVGYGLLRVTRDESWKIRNLFNIPFNFMLAAGFEWGIALQ
EEEECCCCHHCCCCEEECCCCCCCCEEEEECCCCEEEEHEECCCHHHHHHCCCHHHHHHH
HLELRKIWKKETREATKQRLRELVRSAASQLFKDYVAFPAITAASPGATYRSTLTANATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECHHHH
NLLRNFWSNAVIFCGHFPDGAEKFTVTDMENETRGQWYLRQLLGSANFNAGPTMRLMSGN
HHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCC
LCHQIEHHIYPDLPSNRLHEISVRVREICERYDLPYTTGSMLFQYAKTWRTIAKLSLPDR
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
FLHATADNAPETRSERMFVVLEQPQVPGVESVPRRGLKTAIAMVRERRRNKVAV
HHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]