The gene/protein map for NC_010397 is currently unavailable.
Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is nuoF [H]

Identifier: 169629225

GI number: 169629225

Start: 2149827

End: 2151131

Strand: Direct

Name: nuoF [H]

Synonym: MAB_2139

Alternate gene names: 169629225

Gene position: 2149827-2151131 (Clockwise)

Preceding gene: 169629224

Following gene: 169629226

Centisome position: 42.43

GC content: 62.61

Gene sequence:

>1305_bases
ATGACTTCGTCGATTCTCTCTCCGGTCCTGTCGGAGCATTGGGACGAGCCTGATGCCTGGACCTTGGATGGGTATCTGCG
TCATGGCGGATACCGCGGCCTGCGCACCGCGCTGGGGATGGATCCCGATGCGGTGATTGCGCTGGTGAAAGAGGCGGGAC
TGCGCGGGCGTGGTGGGGCAGGATTCCCGACGGGCGCCAAATGGTCATTCATCCCGCAGGGAGACGGTAAGCCGCACTAT
CTGGTGGTTAATGCCGACGAATCCGAACCCGGCACCTGCAAAGACATTCCGCTGATGCTCGCGACACCGCACACACTGAT
CGAGGGAATCGTGATCGCCGCCTTTGCGATTCGTGCTTCACAGGCCTTCATCTACGTGCGCGGCGAGGTCATCTCCGTGA
TCAGGCGGTTGCATGCAGCGGTGGCACAGGCCTACAAGGCCGGATATCTGGGCCGCAATATCCTCGACAGCGGTTTTGAT
CTGGAGCTGGTGGTGCACGCCGGTGCCGGTGCGTACATCTGCGGGGAAGAGACCGCGCTATTGGATTCGTTGGAGGGGCG
GCGCGGACAGCCTCGGCTGCGACCCCCATTCCCGGCCGTTGCCGGCCTGTACGCCAGCCCGACCGTGGTCAACAACGTCG
AATCCATCGCGAGTGTGCCGGTGATCTTGCGCCGCGGCGCCGAATGGTTCCGCACGATGGGAACGGAAAAGTCGCCGGGA
TTCACGCTTTACTCGTTGTCCGGGCATGTGCGTACGCCCGGACAGTACGAGGCGCCGTTGGGCGTGACGCTGCGACAGCT
GCTGGAGCTGGCAGGCGGTGTGCGCGACGGGCGCGCGCTGAAGTTCTGGACTCCCGGTGGCTCCTCGACACCACTGTTCA
CCGCGGAGCAGCTTGATGTACCGCTCGACTACGAGGGTGTCAGTGCTGCCGGATCTATGCTGGGCACCAAGGCATTACAG
ATATTCGACGACACCACGTGTGTTGTGCGCGCGGTACTGCGATGGACCGAGTTCTACGCGCACGAATCCTGCGGCAAGTG
CACTCCCTGTCGTGAGGGCACCTACTGGCTGGTGCGTATTCTCCAGCGACTTGAGTCCGGCGAAGGTAAAGCCGAAGACC
TGGACAAACTTCTCGATATCTCGGACATCGTGCTGGGCAAGTCCTTCTGTGCGCTCGGCGACGGCGCAGCGAGCCCGATC
ATGTCCTCCCTGAAATACTTCCGCACCGAATACGAGGCCCACCTGGACAACGGGTGCCCCTTTGATCCGGCGGCCAGCAC
CGTATTCGGGGAGGTGTCCGCATGA

Upstream 100 bases:

>100_bases
CGGTCGCCGCAGCACAGCCGGGGGACTCGACACTTGCGGGACTGCGGTTGGCCCAGGACGTACAGCGGAACGTTCAGTAC
AAGGCAGACGGGATGAGGCC

Downstream 100 bases:

>100_bases
CCGCGGTACAGCCAGACACCGATCTGGTCACCGTCAACATCGACGGAACCGATATCTCGGTTCCCAAGGGCACCCTGGTC
ATCCGTGCCGCCGAACTCAT

Product: NADH-quinone oxidoreductase, F subunit NuoF

Products: NA

Alternate protein names: NADH dehydrogenase I subunit F; NDH-1 subunit F [H]

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTSSILSPVLSEHWDEPDAWTLDGYLRHGGYRGLRTALGMDPDAVIALVKEAGLRGRGGAGFPTGAKWSFIPQGDGKPHY
LVVNADESEPGTCKDIPLMLATPHTLIEGIVIAAFAIRASQAFIYVRGEVISVIRRLHAAVAQAYKAGYLGRNILDSGFD
LELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPVILRRGAEWFRTMGTEKSPG
FTLYSLSGHVRTPGQYEAPLGVTLRQLLELAGGVRDGRALKFWTPGGSSTPLFTAEQLDVPLDYEGVSAAGSMLGTKALQ
IFDDTTCVVRAVLRWTEFYAHESCGKCTPCREGTYWLVRILQRLESGEGKAEDLDKLLDISDIVLGKSFCALGDGAASPI
MSSLKYFRTEYEAHLDNGCPFDPAASTVFGEVSA

Sequences:

>Translated_434_residues
MTSSILSPVLSEHWDEPDAWTLDGYLRHGGYRGLRTALGMDPDAVIALVKEAGLRGRGGAGFPTGAKWSFIPQGDGKPHY
LVVNADESEPGTCKDIPLMLATPHTLIEGIVIAAFAIRASQAFIYVRGEVISVIRRLHAAVAQAYKAGYLGRNILDSGFD
LELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPVILRRGAEWFRTMGTEKSPG
FTLYSLSGHVRTPGQYEAPLGVTLRQLLELAGGVRDGRALKFWTPGGSSTPLFTAEQLDVPLDYEGVSAAGSMLGTKALQ
IFDDTTCVVRAVLRWTEFYAHESCGKCTPCREGTYWLVRILQRLESGEGKAEDLDKLLDISDIVLGKSFCALGDGAASPI
MSSLKYFRTEYEAHLDNGCPFDPAASTVFGEVSA
>Mature_433_residues
TSSILSPVLSEHWDEPDAWTLDGYLRHGGYRGLRTALGMDPDAVIALVKEAGLRGRGGAGFPTGAKWSFIPQGDGKPHYL
VVNADESEPGTCKDIPLMLATPHTLIEGIVIAAFAIRASQAFIYVRGEVISVIRRLHAAVAQAYKAGYLGRNILDSGFDL
ELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPVILRRGAEWFRTMGTEKSPGF
TLYSLSGHVRTPGQYEAPLGVTLRQLLELAGGVRDGRALKFWTPGGSSTPLFTAEQLDVPLDYEGVSAAGSMLGTKALQI
FDDTTCVVRAVLRWTEFYAHESCGKCTPCREGTYWLVRILQRLESGEGKAEDLDKLLDISDIVLGKSFCALGDGAASPIM
SSLKYFRTEYEAHLDNGCPFDPAASTVFGEVSA

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cyto

COG id: COG1894

COG function: function code C; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 51 kDa subunit family [H]

Homologues:

Organism=Homo sapiens, GI260656005, Length=401, Percent_Identity=46.1346633416459, Blast_Score=371, Evalue=1e-103,
Organism=Homo sapiens, GI20149568, Length=401, Percent_Identity=46.1346633416459, Blast_Score=371, Evalue=1e-103,
Organism=Escherichia coli, GI1788620, Length=417, Percent_Identity=48.6810551558753, Blast_Score=396, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI17531727, Length=400, Percent_Identity=45.5, Blast_Score=364, Evalue=1e-101,
Organism=Drosophila melanogaster, GI19920794, Length=401, Percent_Identity=46.1346633416459, Blast_Score=381, Evalue=1e-106,
Organism=Drosophila melanogaster, GI45550452, Length=414, Percent_Identity=43.719806763285, Blast_Score=361, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24653819, Length=402, Percent_Identity=36.5671641791045, Blast_Score=257, Evalue=1e-68,
Organism=Drosophila melanogaster, GI24653817, Length=355, Percent_Identity=36.056338028169, Blast_Score=224, Evalue=9e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001949
- InterPro:   IPR019575
- InterPro:   IPR011537
- InterPro:   IPR011538
- InterPro:   IPR019554 [H]

Pfam domain/function: PF01512 Complex1_51K; PF10589 NADH_4Fe-4S; PF10531 SLBB [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 46685; Mature: 46553

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00644 COMPLEX1_51K_1 ; PS00645 COMPLEX1_51K_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSILSPVLSEHWDEPDAWTLDGYLRHGGYRGLRTALGMDPDAVIALVKEAGLRGRGGA
CCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
GFPTGAKWSFIPQGDGKPHYLVVNADESEPGTCKDIPLMLATPHTLIEGIVIAAFAIRAS
CCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHC
QAFIYVRGEVISVIRRLHAAVAQAYKAGYLGRNILDSGFDLELVVHAGAGAYICGEETAL
CEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCEEEECCHHHH
LDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPVILRRGAEWFRTMGTEKSPG
HHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
FTLYSLSGHVRTPGQYEAPLGVTLRQLLELAGGVRDGRALKFWTPGGSSTPLFTAEQLDV
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEHHHCCC
PLDYEGVSAAGSMLGTKALQIFDDTTCVVRAVLRWTEFYAHESCGKCTPCREGTYWLVRI
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LQRLESGEGKAEDLDKLLDISDIVLGKSFCALGDGAASPIMSSLKYFRTEYEAHLDNGCP
HHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
FDPAASTVFGEVSA
CCCCHHHHHCCCCC
>Mature Secondary Structure 
TSSILSPVLSEHWDEPDAWTLDGYLRHGGYRGLRTALGMDPDAVIALVKEAGLRGRGGA
CHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
GFPTGAKWSFIPQGDGKPHYLVVNADESEPGTCKDIPLMLATPHTLIEGIVIAAFAIRAS
CCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHC
QAFIYVRGEVISVIRRLHAAVAQAYKAGYLGRNILDSGFDLELVVHAGAGAYICGEETAL
CEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCEEEECCHHHH
LDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPVILRRGAEWFRTMGTEKSPG
HHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
FTLYSLSGHVRTPGQYEAPLGVTLRQLLELAGGVRDGRALKFWTPGGSSTPLFTAEQLDV
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEHHHCCC
PLDYEGVSAAGSMLGTKALQIFDDTTCVVRAVLRWTEFYAHESCGKCTPCREGTYWLVRI
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LQRLESGEGKAEDLDKLLDISDIVLGKSFCALGDGAASPIMSSLKYFRTEYEAHLDNGCP
HHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
FDPAASTVFGEVSA
CCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]