Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is nuoF [H]
Identifier: 169629225
GI number: 169629225
Start: 2149827
End: 2151131
Strand: Direct
Name: nuoF [H]
Synonym: MAB_2139
Alternate gene names: 169629225
Gene position: 2149827-2151131 (Clockwise)
Preceding gene: 169629224
Following gene: 169629226
Centisome position: 42.43
GC content: 62.61
Gene sequence:
>1305_bases ATGACTTCGTCGATTCTCTCTCCGGTCCTGTCGGAGCATTGGGACGAGCCTGATGCCTGGACCTTGGATGGGTATCTGCG TCATGGCGGATACCGCGGCCTGCGCACCGCGCTGGGGATGGATCCCGATGCGGTGATTGCGCTGGTGAAAGAGGCGGGAC TGCGCGGGCGTGGTGGGGCAGGATTCCCGACGGGCGCCAAATGGTCATTCATCCCGCAGGGAGACGGTAAGCCGCACTAT CTGGTGGTTAATGCCGACGAATCCGAACCCGGCACCTGCAAAGACATTCCGCTGATGCTCGCGACACCGCACACACTGAT CGAGGGAATCGTGATCGCCGCCTTTGCGATTCGTGCTTCACAGGCCTTCATCTACGTGCGCGGCGAGGTCATCTCCGTGA TCAGGCGGTTGCATGCAGCGGTGGCACAGGCCTACAAGGCCGGATATCTGGGCCGCAATATCCTCGACAGCGGTTTTGAT CTGGAGCTGGTGGTGCACGCCGGTGCCGGTGCGTACATCTGCGGGGAAGAGACCGCGCTATTGGATTCGTTGGAGGGGCG GCGCGGACAGCCTCGGCTGCGACCCCCATTCCCGGCCGTTGCCGGCCTGTACGCCAGCCCGACCGTGGTCAACAACGTCG AATCCATCGCGAGTGTGCCGGTGATCTTGCGCCGCGGCGCCGAATGGTTCCGCACGATGGGAACGGAAAAGTCGCCGGGA TTCACGCTTTACTCGTTGTCCGGGCATGTGCGTACGCCCGGACAGTACGAGGCGCCGTTGGGCGTGACGCTGCGACAGCT GCTGGAGCTGGCAGGCGGTGTGCGCGACGGGCGCGCGCTGAAGTTCTGGACTCCCGGTGGCTCCTCGACACCACTGTTCA CCGCGGAGCAGCTTGATGTACCGCTCGACTACGAGGGTGTCAGTGCTGCCGGATCTATGCTGGGCACCAAGGCATTACAG ATATTCGACGACACCACGTGTGTTGTGCGCGCGGTACTGCGATGGACCGAGTTCTACGCGCACGAATCCTGCGGCAAGTG CACTCCCTGTCGTGAGGGCACCTACTGGCTGGTGCGTATTCTCCAGCGACTTGAGTCCGGCGAAGGTAAAGCCGAAGACC TGGACAAACTTCTCGATATCTCGGACATCGTGCTGGGCAAGTCCTTCTGTGCGCTCGGCGACGGCGCAGCGAGCCCGATC ATGTCCTCCCTGAAATACTTCCGCACCGAATACGAGGCCCACCTGGACAACGGGTGCCCCTTTGATCCGGCGGCCAGCAC CGTATTCGGGGAGGTGTCCGCATGA
Upstream 100 bases:
>100_bases CGGTCGCCGCAGCACAGCCGGGGGACTCGACACTTGCGGGACTGCGGTTGGCCCAGGACGTACAGCGGAACGTTCAGTAC AAGGCAGACGGGATGAGGCC
Downstream 100 bases:
>100_bases CCGCGGTACAGCCAGACACCGATCTGGTCACCGTCAACATCGACGGAACCGATATCTCGGTTCCCAAGGGCACCCTGGTC ATCCGTGCCGCCGAACTCAT
Product: NADH-quinone oxidoreductase, F subunit NuoF
Products: NA
Alternate protein names: NADH dehydrogenase I subunit F; NDH-1 subunit F [H]
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MTSSILSPVLSEHWDEPDAWTLDGYLRHGGYRGLRTALGMDPDAVIALVKEAGLRGRGGAGFPTGAKWSFIPQGDGKPHY LVVNADESEPGTCKDIPLMLATPHTLIEGIVIAAFAIRASQAFIYVRGEVISVIRRLHAAVAQAYKAGYLGRNILDSGFD LELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPVILRRGAEWFRTMGTEKSPG FTLYSLSGHVRTPGQYEAPLGVTLRQLLELAGGVRDGRALKFWTPGGSSTPLFTAEQLDVPLDYEGVSAAGSMLGTKALQ IFDDTTCVVRAVLRWTEFYAHESCGKCTPCREGTYWLVRILQRLESGEGKAEDLDKLLDISDIVLGKSFCALGDGAASPI MSSLKYFRTEYEAHLDNGCPFDPAASTVFGEVSA
Sequences:
>Translated_434_residues MTSSILSPVLSEHWDEPDAWTLDGYLRHGGYRGLRTALGMDPDAVIALVKEAGLRGRGGAGFPTGAKWSFIPQGDGKPHY LVVNADESEPGTCKDIPLMLATPHTLIEGIVIAAFAIRASQAFIYVRGEVISVIRRLHAAVAQAYKAGYLGRNILDSGFD LELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPVILRRGAEWFRTMGTEKSPG FTLYSLSGHVRTPGQYEAPLGVTLRQLLELAGGVRDGRALKFWTPGGSSTPLFTAEQLDVPLDYEGVSAAGSMLGTKALQ IFDDTTCVVRAVLRWTEFYAHESCGKCTPCREGTYWLVRILQRLESGEGKAEDLDKLLDISDIVLGKSFCALGDGAASPI MSSLKYFRTEYEAHLDNGCPFDPAASTVFGEVSA >Mature_433_residues TSSILSPVLSEHWDEPDAWTLDGYLRHGGYRGLRTALGMDPDAVIALVKEAGLRGRGGAGFPTGAKWSFIPQGDGKPHYL VVNADESEPGTCKDIPLMLATPHTLIEGIVIAAFAIRASQAFIYVRGEVISVIRRLHAAVAQAYKAGYLGRNILDSGFDL ELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPVILRRGAEWFRTMGTEKSPGF TLYSLSGHVRTPGQYEAPLGVTLRQLLELAGGVRDGRALKFWTPGGSSTPLFTAEQLDVPLDYEGVSAAGSMLGTKALQI FDDTTCVVRAVLRWTEFYAHESCGKCTPCREGTYWLVRILQRLESGEGKAEDLDKLLDISDIVLGKSFCALGDGAASPIM SSLKYFRTEYEAHLDNGCPFDPAASTVFGEVSA
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cyto
COG id: COG1894
COG function: function code C; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I 51 kDa subunit family [H]
Homologues:
Organism=Homo sapiens, GI260656005, Length=401, Percent_Identity=46.1346633416459, Blast_Score=371, Evalue=1e-103, Organism=Homo sapiens, GI20149568, Length=401, Percent_Identity=46.1346633416459, Blast_Score=371, Evalue=1e-103, Organism=Escherichia coli, GI1788620, Length=417, Percent_Identity=48.6810551558753, Blast_Score=396, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17531727, Length=400, Percent_Identity=45.5, Blast_Score=364, Evalue=1e-101, Organism=Drosophila melanogaster, GI19920794, Length=401, Percent_Identity=46.1346633416459, Blast_Score=381, Evalue=1e-106, Organism=Drosophila melanogaster, GI45550452, Length=414, Percent_Identity=43.719806763285, Blast_Score=361, Evalue=1e-100, Organism=Drosophila melanogaster, GI24653819, Length=402, Percent_Identity=36.5671641791045, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24653817, Length=355, Percent_Identity=36.056338028169, Blast_Score=224, Evalue=9e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001949 - InterPro: IPR019575 - InterPro: IPR011537 - InterPro: IPR011538 - InterPro: IPR019554 [H]
Pfam domain/function: PF01512 Complex1_51K; PF10589 NADH_4Fe-4S; PF10531 SLBB [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 46685; Mature: 46553
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00644 COMPLEX1_51K_1 ; PS00645 COMPLEX1_51K_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSILSPVLSEHWDEPDAWTLDGYLRHGGYRGLRTALGMDPDAVIALVKEAGLRGRGGA CCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCC GFPTGAKWSFIPQGDGKPHYLVVNADESEPGTCKDIPLMLATPHTLIEGIVIAAFAIRAS CCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHC QAFIYVRGEVISVIRRLHAAVAQAYKAGYLGRNILDSGFDLELVVHAGAGAYICGEETAL CEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCEEEECCHHHH LDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPVILRRGAEWFRTMGTEKSPG HHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC FTLYSLSGHVRTPGQYEAPLGVTLRQLLELAGGVRDGRALKFWTPGGSSTPLFTAEQLDV EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEHHHCCC PLDYEGVSAAGSMLGTKALQIFDDTTCVVRAVLRWTEFYAHESCGKCTPCREGTYWLVRI CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LQRLESGEGKAEDLDKLLDISDIVLGKSFCALGDGAASPIMSSLKYFRTEYEAHLDNGCP HHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC FDPAASTVFGEVSA CCCCHHHHHCCCCC >Mature Secondary Structure TSSILSPVLSEHWDEPDAWTLDGYLRHGGYRGLRTALGMDPDAVIALVKEAGLRGRGGA CHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCC GFPTGAKWSFIPQGDGKPHYLVVNADESEPGTCKDIPLMLATPHTLIEGIVIAAFAIRAS CCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHC QAFIYVRGEVISVIRRLHAAVAQAYKAGYLGRNILDSGFDLELVVHAGAGAYICGEETAL CEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCEEEECCHHHH LDSLEGRRGQPRLRPPFPAVAGLYASPTVVNNVESIASVPVILRRGAEWFRTMGTEKSPG HHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC FTLYSLSGHVRTPGQYEAPLGVTLRQLLELAGGVRDGRALKFWTPGGSSTPLFTAEQLDV EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEHHHCCC PLDYEGVSAAGSMLGTKALQIFDDTTCVVRAVLRWTEFYAHESCGKCTPCREGTYWLVRI CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LQRLESGEGKAEDLDKLLDISDIVLGKSFCALGDGAASPIMSSLKYFRTEYEAHLDNGCP HHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC FDPAASTVFGEVSA CCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]