| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is ucpA [C]
Identifier: 169629203
GI number: 169629203
Start: 2115196
End: 2116077
Strand: Direct
Name: ucpA [C]
Synonym: MAB_2117
Alternate gene names: 169629203
Gene position: 2115196-2116077 (Clockwise)
Preceding gene: 169629202
Following gene: 169629204
Centisome position: 41.74
GC content: 63.83
Gene sequence:
>882_bases ATGGGTTCAACGGCGAACGGTGTTGCGGGCAAGACGGTCATGATCACCGGCGGTGCCGGCGGAATCGGTGTCGAGGTGGC GCACCGGCTGTATGCCAAGGGCGCCAACGTGGTGCTCACCGACCTGGACGAGGCCAAACTTGCCGCGATAGCGGACGAGC TGGGCGGTGATCGTGTACTGGTGGCGGTCGCCGATGTGTGCGACCTGACGGCCATGGAGAAAGTTGCCGCGCAGGCTGTC CAGCGGTTCGGCGGAATCGACGTGGTAGTCGCGAACGCCGGTCTGCTGACTTTCGGTTCGGTACTGCAGATCGATCCGGC CACCTTCAAGAAGCTGATCGACGTGAACGTGCTGGGTGTATTTCACACGGTGCGCGCCGCACTGCCGTCGGTGATCGAAC GACGGGGGTACGTGCTCGTCGTGTCCTCGCTAGCCGCCTACGCCGCCTCGCCCGCGGTCACCGCGTATAACGCCTCCAAG GCGGCCGTGGAACATTTCGCCAATGCTTTGCGGCTGGAGGTCGCACATCGCGGTGTCGATGTCGGTTCGGCCCACATGTC CTGGATAGACACCTCGATGGTGAATGACCAGAAGTCGAATCTTTCGGCGTTCTCCGAGATGTTGACGCGACTGCCACCGC CGCTGCGCACAGTGACGTCCGTGCAAGCCTGCGGTAGGGCCTTTGTGAAAGGGATCGAACGGCGCAGCCGACGCATCAAC TGTCCGGGCTGGGTCGGTATCACGCGGTGGCTCAAGCCTGTGCTCTCGACCCGACTGGGCGAAATCCCGGTGCGGGGCAT GATTCCTGAGATTCTGCCGCGTATTGACGCGGAGGTGGCCGAGTTGCAACGGGCTGCCCGCGACGCCATCGAGCGGCCGT AG
Upstream 100 bases:
>100_bases GACCGATGCACTGGCATACGGCGGTCACGATGCTGCGGCCGGCGCGCAGGTGCGCGATGCGGTGGATGCCCTGCTGGGAG TGCAGTTGTAGCGTCGTCGC
Downstream 100 bases:
>100_bases CGGCACTTTCTGCTGTGCGAGACCTCATTGGATACCCGCTACGGGTATGGGGTTAGGTGTAGGGTGGCCTCATGTCGCTC AGCGGTCTCAAGGACACGAT
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MGSTANGVAGKTVMITGGAGGIGVEVAHRLYAKGANVVLTDLDEAKLAAIADELGGDRVLVAVADVCDLTAMEKVAAQAV QRFGGIDVVVANAGLLTFGSVLQIDPATFKKLIDVNVLGVFHTVRAALPSVIERRGYVLVVSSLAAYAASPAVTAYNASK AAVEHFANALRLEVAHRGVDVGSAHMSWIDTSMVNDQKSNLSAFSEMLTRLPPPLRTVTSVQACGRAFVKGIERRSRRIN CPGWVGITRWLKPVLSTRLGEIPVRGMIPEILPRIDAEVAELQRAARDAIERP
Sequences:
>Translated_293_residues MGSTANGVAGKTVMITGGAGGIGVEVAHRLYAKGANVVLTDLDEAKLAAIADELGGDRVLVAVADVCDLTAMEKVAAQAV QRFGGIDVVVANAGLLTFGSVLQIDPATFKKLIDVNVLGVFHTVRAALPSVIERRGYVLVVSSLAAYAASPAVTAYNASK AAVEHFANALRLEVAHRGVDVGSAHMSWIDTSMVNDQKSNLSAFSEMLTRLPPPLRTVTSVQACGRAFVKGIERRSRRIN CPGWVGITRWLKPVLSTRLGEIPVRGMIPEILPRIDAEVAELQRAARDAIERP >Mature_292_residues GSTANGVAGKTVMITGGAGGIGVEVAHRLYAKGANVVLTDLDEAKLAAIADELGGDRVLVAVADVCDLTAMEKVAAQAVQ RFGGIDVVVANAGLLTFGSVLQIDPATFKKLIDVNVLGVFHTVRAALPSVIERRGYVLVVSSLAAYAASPAVTAYNASKA AVEHFANALRLEVAHRGVDVGSAHMSWIDTSMVNDQKSNLSAFSEMLTRLPPPLRTVTSVQACGRAFVKGIERRSRRINC PGWVGITRWLKPVLSTRLGEIPVRGMIPEILPRIDAEVAELQRAARDAIERP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4503817, Length=190, Percent_Identity=34.2105263157895, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI32483357, Length=209, Percent_Identity=30.622009569378, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI20149619, Length=190, Percent_Identity=30.5263157894737, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI126723191, Length=184, Percent_Identity=32.0652173913043, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI32455239, Length=177, Percent_Identity=34.4632768361582, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI5031765, Length=177, Percent_Identity=34.4632768361582, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI7706318, Length=170, Percent_Identity=31.7647058823529, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI33667109, Length=177, Percent_Identity=32.7683615819209, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI210032110, Length=258, Percent_Identity=28.6821705426357, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI5031737, Length=177, Percent_Identity=32.7683615819209, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI157739938, Length=208, Percent_Identity=26.9230769230769, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI44680136, Length=187, Percent_Identity=31.0160427807487, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI44680133, Length=187, Percent_Identity=31.0160427807487, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI17738292, Length=187, Percent_Identity=31.0160427807487, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI38348362, Length=177, Percent_Identity=30.5084745762712, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI310128830, Length=271, Percent_Identity=26.9372693726937, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI310115468, Length=271, Percent_Identity=26.9372693726937, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4758504, Length=229, Percent_Identity=27.5109170305677, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI83715985, Length=176, Percent_Identity=31.25, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI38424085, Length=175, Percent_Identity=30.8571428571429, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI226371731, Length=200, Percent_Identity=27, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI302344755, Length=112, Percent_Identity=36.6071428571429, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI7657478, Length=174, Percent_Identity=33.9080459770115, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI40807363, Length=260, Percent_Identity=25, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI142976729, Length=202, Percent_Identity=26.2376237623762, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI59889578, Length=152, Percent_Identity=33.5526315789474, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI150247226, Length=239, Percent_Identity=30.9623430962343, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI19743808, Length=198, Percent_Identity=32.8282828282828, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI7705855, Length=255, Percent_Identity=26.2745098039216, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87082100, Length=215, Percent_Identity=33.0232558139535, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1787335, Length=202, Percent_Identity=29.2079207920792, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787820, Length=169, Percent_Identity=30.7692307692308, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI87082160, Length=208, Percent_Identity=26.4423076923077, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790717, Length=212, Percent_Identity=26.8867924528302, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI2367365, Length=188, Percent_Identity=31.9148936170213, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789378, Length=177, Percent_Identity=27.1186440677966, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789208, Length=211, Percent_Identity=24.1706161137441, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1786701, Length=177, Percent_Identity=28.8135593220339, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787905, Length=182, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786812, Length=225, Percent_Identity=28.8888888888889, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17567345, Length=263, Percent_Identity=25.4752851711027, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71994604, Length=202, Percent_Identity=32.1782178217822, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71994600, Length=174, Percent_Identity=32.7586206896552, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI72000259, Length=189, Percent_Identity=32.2751322751323, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17563726, Length=194, Percent_Identity=30.4123711340206, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17508895, Length=191, Percent_Identity=27.2251308900524, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17562990, Length=194, Percent_Identity=28.3505154639175, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17538182, Length=220, Percent_Identity=29.0909090909091, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71997402, Length=189, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17562904, Length=199, Percent_Identity=28.1407035175879, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=26.8041237113402, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193203117, Length=193, Percent_Identity=27.4611398963731, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17561402, Length=228, Percent_Identity=26.7543859649123, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI193203115, Length=193, Percent_Identity=27.4611398963731, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17560220, Length=193, Percent_Identity=28.4974093264249, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17570069, Length=188, Percent_Identity=29.2553191489362, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17560676, Length=180, Percent_Identity=28.3333333333333, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25147288, Length=191, Percent_Identity=28.7958115183246, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI115534694, Length=204, Percent_Identity=28.4313725490196, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17568967, Length=179, Percent_Identity=28.4916201117318, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17560332, Length=195, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17562908, Length=211, Percent_Identity=27.4881516587678, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193204405, Length=187, Percent_Identity=28.3422459893048, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17560150, Length=183, Percent_Identity=26.775956284153, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71982365, Length=143, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17562910, Length=197, Percent_Identity=27.9187817258883, Blast_Score=64, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17562906, Length=185, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17551412, Length=227, Percent_Identity=25.1101321585903, Blast_Score=64, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6322226, Length=167, Percent_Identity=34.1317365269461, Blast_Score=83, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6322227, Length=201, Percent_Identity=29.3532338308458, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324126, Length=176, Percent_Identity=27.8409090909091, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322861, Length=183, Percent_Identity=27.8688524590164, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI23397609, Length=186, Percent_Identity=32.7956989247312, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI28571526, Length=186, Percent_Identity=32.7956989247312, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24644339, Length=176, Percent_Identity=28.9772727272727, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI21357041, Length=186, Percent_Identity=30.1075268817204, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI21358495, Length=195, Percent_Identity=28.2051282051282, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI17737361, Length=219, Percent_Identity=28.7671232876712, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI161076933, Length=195, Percent_Identity=31.2820512820513, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI24584748, Length=195, Percent_Identity=31.2820512820513, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI21355631, Length=269, Percent_Identity=23.7918215613383, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24640442, Length=203, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI281364892, Length=171, Percent_Identity=31.5789473684211, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24649181, Length=249, Percent_Identity=24.8995983935743, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24644337, Length=204, Percent_Identity=29.9019607843137, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24640492, Length=212, Percent_Identity=28.3018867924528, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24584744, Length=189, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574402, Length=189, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641232, Length=200, Percent_Identity=26.5, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21355319, Length=215, Percent_Identity=27.906976744186, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI116007236, Length=194, Percent_Identity=26.2886597938144, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24580925, Length=192, Percent_Identity=28.125, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI24639444, Length=191, Percent_Identity=27.7486910994764, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581726, Length=212, Percent_Identity=25, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007238, Length=172, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 31013; Mature: 30882
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTANGVAGKTVMITGGAGGIGVEVAHRLYAKGANVVLTDLDEAKLAAIADELGGDRVL CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEE VAVADVCDLTAMEKVAAQAVQRFGGIDVVVANAGLLTFGSVLQIDPATFKKLIDVNVLGV EEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHEECHHHHHHHHHHHHHHH FHTVRAALPSVIERRGYVLVVSSLAAYAASPAVTAYNASKAAVEHFANALRLEVAHRGVD HHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCC VGSAHMSWIDTSMVNDQKSNLSAFSEMLTRLPPPLRTVTSVQACGRAFVKGIERRSRRIN CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC CPGWVGITRWLKPVLSTRLGEIPVRGMIPEILPRIDAEVAELQRAARDAIERP CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure GSTANGVAGKTVMITGGAGGIGVEVAHRLYAKGANVVLTDLDEAKLAAIADELGGDRVL CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEE VAVADVCDLTAMEKVAAQAVQRFGGIDVVVANAGLLTFGSVLQIDPATFKKLIDVNVLGV EEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHEECHHHHHHHHHHHHHHH FHTVRAALPSVIERRGYVLVVSSLAAYAASPAVTAYNASKAAVEHFANALRLEVAHRGVD HHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCC VGSAHMSWIDTSMVNDQKSNLSAFSEMLTRLPPPLRTVTSVQACGRAFVKGIERRSRRIN CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC CPGWVGITRWLKPVLSTRLGEIPVRGMIPEILPRIDAEVAELQRAARDAIERP CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA