Click here to switch to the map view.

The map label for this gene is 169629177

Identifier: 169629177

GI number: 169629177

Start: 2091174

End: 2092289

Strand: Direct

Name: 169629177

Synonym: MAB_2091

Alternate gene names: NA

Gene position: 2091174-2092289 (Clockwise)

Preceding gene: 169629176

Following gene: 169629178

Centisome position: 41.27

GC content: 64.96

Gene sequence:

>1116_bases
ATGGATGTAGTTCCCGCGACGCCTGCCAACCTTGGTAATGGTACGTCCTCGCCGGGACCTGGCGAATTCGCCGCGCAGGT
CTATCCAGCAGCCGAGCGCGAGGCGGCTGGCCCGCGCCCCGAGCGCTTCCAGGTCCTCGCTCTCGATGGAGGGGGCGCCA
AGGCGTTGTTCACTGCGCATGTGCTTGCACGTCTGGAGCAGGATCTGGGCGTTAGGATCACCGATTCCTTCGACCTCATT
GCTGGCACGTCGGCGGGCGGCATCGTCGCACTGGGTCTCGGTGCGGGCCTCACGCCGAAGGAGATTGTCTCCCACTACGA
AGAACTGGTCGAGAAAGTCTTTCCGGCGTCGAGGCGGCGAGGATGGCGCCGACCACGGCAGCTGAGATCGCCCATCTATG
ACGCAGAGGCGCTGCGGCAAGCGTTGACCGGCGTCCTCGGAGCCCGACTCCTTGGCGACAGCACGAAGCGACTCGTCATT
CCCGCGTGGGATGTACAACGCGGGGCCGTGCACATCTTCAAGACTCCGCACCACACACGGCTGACCCGCGACTGGCGCAT
ACCGATGGTGGACGTTGCACTGGCGACCTCGGCGGCGCCGCTGTACTTCCCCGCGGCGTACGTCGACGGACACAGGCTCA
TTGACGGCGGAGTATGGGCCAACAACCCGGCTGTCGTCGCGATCGCCGAGGCCGTCAGCATGCTCGGTGTTCCTCTCGAC
GCGATTACCGTCCTCAACGTCGGCACCATTGATCAGCTGACCGATCACCCCAAGCGCTTGGACCGCGGCGGACTCTTACA
CTGGGCAAGACCGATTGCCCCGCTGATCCTTAACGCCAGCAGCCGTGGCGGACAGGGCCTCGCCGAACACTTGATCGGCA
AATCCAACTACACGCGCTTCGACGCTCTAGTGCCCGGCGGCCTCTACGCACTGGACTCGGCGGGCCCAAAGGACGTGGCC
GGCCTCGCTGCCTCAGTCAGCCGAGAACTCAGCCCTAGCTACACCGCGAAATTCGCTGACCACCAGGCGCCCGCATACAC
ACCGGTGAACGGACGCCGACACCGCGACGATCCGGGCAGCATTTCACACACGGAGGCCCCCAATGCAACTCGCTGA

Upstream 100 bases:

>100_bases
GCTGAGCCGGAGCATTGACATGGCTGCTGGCTGCGCGGGTCCCCACGCCGGTGGCAATAACGGCTAGGTCGTTGTCGGCG
GAGCGGCGTAGTCTAGTTAC

Downstream 100 bases:

>100_bases
CCACTTCAACGTCTTGCTGAAAGACACGGTCAATCTCAGCCAGTTCAAACTGGACCTACTCAACCAGCGCGTCGAAGCCA
TCTATAAGGCACTCAAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Patatin Family Protein; Patatin-Related Protein; Patatin-Like Phospholipase; Patatin-Like Protein; Phospholipase Patatin Family; Patatin Family Phospholipase; Phospholipase

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MDVVPATPANLGNGTSSPGPGEFAAQVYPAAEREAAGPRPERFQVLALDGGGAKALFTAHVLARLEQDLGVRITDSFDLI
AGTSAGGIVALGLGAGLTPKEIVSHYEELVEKVFPASRRRGWRRPRQLRSPIYDAEALRQALTGVLGARLLGDSTKRLVI
PAWDVQRGAVHIFKTPHHTRLTRDWRIPMVDVALATSAAPLYFPAAYVDGHRLIDGGVWANNPAVVAIAEAVSMLGVPLD
AITVLNVGTIDQLTDHPKRLDRGGLLHWARPIAPLILNASSRGGQGLAEHLIGKSNYTRFDALVPGGLYALDSAGPKDVA
GLAASVSRELSPSYTAKFADHQAPAYTPVNGRRHRDDPGSISHTEAPNATR

Sequences:

>Translated_371_residues
MDVVPATPANLGNGTSSPGPGEFAAQVYPAAEREAAGPRPERFQVLALDGGGAKALFTAHVLARLEQDLGVRITDSFDLI
AGTSAGGIVALGLGAGLTPKEIVSHYEELVEKVFPASRRRGWRRPRQLRSPIYDAEALRQALTGVLGARLLGDSTKRLVI
PAWDVQRGAVHIFKTPHHTRLTRDWRIPMVDVALATSAAPLYFPAAYVDGHRLIDGGVWANNPAVVAIAEAVSMLGVPLD
AITVLNVGTIDQLTDHPKRLDRGGLLHWARPIAPLILNASSRGGQGLAEHLIGKSNYTRFDALVPGGLYALDSAGPKDVA
GLAASVSRELSPSYTAKFADHQAPAYTPVNGRRHRDDPGSISHTEAPNATR
>Mature_371_residues
MDVVPATPANLGNGTSSPGPGEFAAQVYPAAEREAAGPRPERFQVLALDGGGAKALFTAHVLARLEQDLGVRITDSFDLI
AGTSAGGIVALGLGAGLTPKEIVSHYEELVEKVFPASRRRGWRRPRQLRSPIYDAEALRQALTGVLGARLLGDSTKRLVI
PAWDVQRGAVHIFKTPHHTRLTRDWRIPMVDVALATSAAPLYFPAAYVDGHRLIDGGVWANNPAVVAIAEAVSMLGVPLD
AITVLNVGTIDQLTDHPKRLDRGGLLHWARPIAPLILNASSRGGQGLAEHLIGKSNYTRFDALVPGGLYALDSAGPKDVA
GLAASVSRELSPSYTAKFADHQAPAYTPVNGRRHRDDPGSISHTEAPNATR

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17544092, Length=210, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17551040, Length=205, Percent_Identity=28.2926829268293, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17567809, Length=205, Percent_Identity=27.3170731707317, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39430; Mature: 39430

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVVPATPANLGNGTSSPGPGEFAAQVYPAAEREAAGPRPERFQVLALDGGGAKALFTAH
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHH
VLARLEQDLGVRITDSFDLIAGTSAGGIVALGLGAGLTPKEIVSHYEELVEKVFPASRRR
HHHHHHHHCCEEEECCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHH
GWRRPRQLRSPIYDAEALRQALTGVLGARLLGDSTKRLVIPAWDVQRGAVHIFKTPHHTR
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCC
LTRDWRIPMVDVALATSAAPLYFPAAYVDGHRLIDGGVWANNPAVVAIAEAVSMLGVPLD
CCCCCCCCEEEHHHHCCCCCCEECCEEECCCEEEECCEECCCCCEEEHHHHHHHHCCCHH
AITVLNVGTIDQLTDHPKRLDRGGLLHWARPIAPLILNASSRGGQGLAEHLIGKSNYTRF
HEEEEECCCHHHHHCCHHHHCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCCEE
DALVPGGLYALDSAGPKDVAGLAASVSRELSPSYTAKFADHQAPAYTPVNGRRHRDDPGS
EEECCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
ISHTEAPNATR
CCCCCCCCCCC
>Mature Secondary Structure
MDVVPATPANLGNGTSSPGPGEFAAQVYPAAEREAAGPRPERFQVLALDGGGAKALFTAH
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHH
VLARLEQDLGVRITDSFDLIAGTSAGGIVALGLGAGLTPKEIVSHYEELVEKVFPASRRR
HHHHHHHHCCEEEECCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHH
GWRRPRQLRSPIYDAEALRQALTGVLGARLLGDSTKRLVIPAWDVQRGAVHIFKTPHHTR
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCC
LTRDWRIPMVDVALATSAAPLYFPAAYVDGHRLIDGGVWANNPAVVAIAEAVSMLGVPLD
CCCCCCCCEEEHHHHCCCCCCEECCEEECCCEEEECCEECCCCCEEEHHHHHHHHCCCHH
AITVLNVGTIDQLTDHPKRLDRGGLLHWARPIAPLILNASSRGGQGLAEHLIGKSNYTRF
HEEEEECCCHHHHHCCHHHHCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCCEE
DALVPGGLYALDSAGPKDVAGLAASVSRELSPSYTAKFADHQAPAYTPVNGRRHRDDPGS
EEECCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
ISHTEAPNATR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA