Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629176
Identifier: 169629176
GI number: 169629176
Start: 2090253
End: 2090996
Strand: Direct
Name: 169629176
Synonym: MAB_2090
Alternate gene names: NA
Gene position: 2090253-2090996 (Clockwise)
Preceding gene: 169629175
Following gene: 169629177
Centisome position: 41.25
GC content: 65.19
Gene sequence:
>744_bases GTGACCGGAACAGCATCGGTGCAAATCGCCTGCACTGCGGTGGCCGACGACAACGGAATGCGTGCACTGCGCGACGTGGC CGCAGTCACTGCCGACATCGAGTACCGCGTCATCGGCGGTCACATGGTGCGACTGCTGCGGCACGTCTACAACGTGTCGG GCATACCGCGACTGACCTCCGACGCAGACACCGGGATCGACGTCAACGTGGCGTCCACCGGGAACCTCCACGATCGACTC ACCGCACTGGGGTACACCGCTGAATGCGGCAACCGCTACGAGCGGGGTGAGCAAGCGGTCGACCTCTTAGTTCCCACCGC AGCCAAACCAGGCAAGCGGATCATCGGCGAACGAGCCTTCGACGGAGCGCCAGGGCTGCGGTTGGCGCTCGCCCTACCGC CGATCGAAGTCGCCGTCACAGCCCGACTCACCGACGGCGACACGGTTGAGTTCGAAGTTCCGGTTCCCGACGTCGAGGCA GCATTCGTGTTGAAGATGCTGGCACGTACCGTTCGCGACTCCGAACGTGACCTCCAGGATATCGAGACACTACTGGAGAT CGTCGCGTCACAACCCGATTACCACGCTTCGCCGTGGCGCCTGGGCGACCCCAAGATCACAAAGGCCGGCGAGCGCGGCG ACGCTGCGCGTGTGGCAGCGCAGATGATCTCCAGTCCGCCGACGAGGGTGCCGGCCAGAGTGCGGGCGCTGCTCCGGCGC CATGTCGCCATCGTGTCGCGATGA
Upstream 100 bases:
>100_bases TCATCACTGTGGATCCAGTGATTGCGCTTCAGGACCTCAGCGGCGGTGCCGATCTTGGCGACGGTGCACCGCAGCATCTC AGCGACTGGATCGTGCACCG
Downstream 100 bases:
>100_bases CGCACCAGCAGACAGTCGTTCGTTTCCGTGCGGCTACGCCGAGCGAAACGGTTTCGGTCTCGACGGAGCCGACAAATGCT GAGCCGGAGCATTGACATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTGTASVQIACTAVADDNGMRALRDVAAVTADIEYRVIGGHMVRLLRHVYNVSGIPRLTSDADTGIDVNVASTGNLHDRL TALGYTAECGNRYERGEQAVDLLVPTAAKPGKRIIGERAFDGAPGLRLALALPPIEVAVTARLTDGDTVEFEVPVPDVEA AFVLKMLARTVRDSERDLQDIETLLEIVASQPDYHASPWRLGDPKITKAGERGDAARVAAQMISSPPTRVPARVRALLRR HVAIVSR
Sequences:
>Translated_247_residues MTGTASVQIACTAVADDNGMRALRDVAAVTADIEYRVIGGHMVRLLRHVYNVSGIPRLTSDADTGIDVNVASTGNLHDRL TALGYTAECGNRYERGEQAVDLLVPTAAKPGKRIIGERAFDGAPGLRLALALPPIEVAVTARLTDGDTVEFEVPVPDVEA AFVLKMLARTVRDSERDLQDIETLLEIVASQPDYHASPWRLGDPKITKAGERGDAARVAAQMISSPPTRVPARVRALLRR HVAIVSR >Mature_246_residues TGTASVQIACTAVADDNGMRALRDVAAVTADIEYRVIGGHMVRLLRHVYNVSGIPRLTSDADTGIDVNVASTGNLHDRLT ALGYTAECGNRYERGEQAVDLLVPTAAKPGKRIIGERAFDGAPGLRLALALPPIEVAVTARLTDGDTVEFEVPVPDVEAA FVLKMLARTVRDSERDLQDIETLLEIVASQPDYHASPWRLGDPKITKAGERGDAARVAAQMISSPPTRVPARVRALLRRH VAIVSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26563; Mature: 26431
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTASVQIACTAVADDNGMRALRDVAAVTADIEYRVIGGHMVRLLRHVYNVSGIPRLTS CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCCCCCC DADTGIDVNVASTGNLHDRLTALGYTAECGNRYERGEQAVDLLVPTAAKPGKRIIGERAF CCCCCEEEEEECCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHEECCCCCCCHHHHCCCCC DGAPGLRLALALPPIEVAVTARLTDGDTVEFEVPVPDVEAAFVLKMLARTVRDSERDLQD CCCCCCEEEEECCCEEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH IETLLEIVASQPDYHASPWRLGDPKITKAGERGDAARVAAQMISSPPTRVPARVRALLRR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH HVAIVSR HHHHHCC >Mature Secondary Structure TGTASVQIACTAVADDNGMRALRDVAAVTADIEYRVIGGHMVRLLRHVYNVSGIPRLTS CCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCCCCCC DADTGIDVNVASTGNLHDRLTALGYTAECGNRYERGEQAVDLLVPTAAKPGKRIIGERAF CCCCCEEEEEECCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHEECCCCCCCHHHHCCCCC DGAPGLRLALALPPIEVAVTARLTDGDTVEFEVPVPDVEAAFVLKMLARTVRDSERDLQD CCCCCCEEEEECCCEEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH IETLLEIVASQPDYHASPWRLGDPKITKAGERGDAARVAAQMISSPPTRVPARVRALLRR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH HVAIVSR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA