Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628980
Identifier: 169628980
GI number: 169628980
Start: 1889519
End: 1890793
Strand: Direct
Name: 169628980
Synonym: MAB_1892
Alternate gene names: NA
Gene position: 1889519-1890793 (Clockwise)
Preceding gene: 169628979
Following gene: 169628981
Centisome position: 37.29
GC content: 64.31
Gene sequence:
>1275_bases ATGAGCATCCGCACCCGTGGCGCCGCGTTGTTGGCCGCGTTGGCATGTGTTTCGTTAGTCGTAATCGGTTCTATGCCAAA AACTTTGGCGGATCCTGGGCAGCCGCCTCCGCCCAAGCCCCTTCCCAATCCGGTGGCCCAGCCCGATGATCTTCCGCGCA TAGCGCCGATCGGTGGGGCGCAGGTCAAGACGAATACCCCGTTGGGTTTGGGGCCGGGAACCGGGAGGCCGCTGGCGGCG GGCCGTGAGCGTTCCAATGCCACCATCTCACCGTCACCTACCGACGGTACGCATCTGCCGACAGCGATCGCCGGTAAGGA TGTTGTCCTGCATCTGCCGCAGGAGCGCGATCTGACTCCGGCGCAGTGGGGCGATGGGGGATCGGCCACCTTCACCTCTC GCGACACCGATTACCGCATTTCACCGTTCGCCGGGGGCGGTGTGGACGTGAACATCATTCGGCGCACCATCTTTACGCCG GAGAACTTCACCTTCGGTCTGCGGGTTCCTGAGGGCACTCATGTGCGCCAGGGCGCCAATGTGGTGTTGGTCGAGTCCGA TGCCGCACCGGGTCTGCCCGCCACGACTATCGCAACGTTGTCAGTGCCTGTGGCACGCGATGCCAAGGGCAATCCGGTGC AGGTGACTCCGGTGATCCATGGCGATTACGTGTATCAACAGTCCAACCTGGCGCTGGACCTGGGGCCTGCGGACATCTTC GCTTTCCCGGTGACGATCACGTTGTCCTACCGCGCGTCCTCGGTTCCGGCGAGTGGGCAACTGGCCAGCGACTGGGAGGG GCTGCCCGAGGGTGGTGGTCCGCCGGAGGCTAAGAAGGCGGCCCAGATCATCGGCGCGCCAGGAGATTACGTGGTCGATC CGGGTGGCGCGCATCGGCCGGGGAATGTCGATCCGGTGCTGTATGCGCAGCGGCATGCTGACCGGTGCCTGTCGGGGCCC AACGAATTCCGCTCGGAGGATGGACGCACGGCCGACTTCTGGAGCTCGTGCCAGCGCCAGGCCATGTGCCTAGATGTCAC GCCGGGGCAGACGTCGGTCGAGGTGTGCAAGAACCAGGCGTTCGCGAACATGTCGGCCCAGTGCACCGCAACGTTCGGAC AGACCGGGCCCGATTACGAGGCATGCCTGAACGTCGCCAACGGACACGCGGCATGGTCCAAGGAGAACCTGTTGGGCGGG GGACTATGCCAGCCCGTCGGGCCGGGAACCAACACCAGATTCTTGCCCTCCAACAACAACCGATATTGCAGTTGA
Upstream 100 bases:
>100_bases GTGGTGGTCAGGTGAAGATTCAGTCCTTTGCGACGTTCCGGATCCGTACCGAGAACGGCAATGACACCCAGACCATCTAC GGCGAGCCTAAGGACCTGTG
Downstream 100 bases:
>100_bases CCGTTGAGGCAATCGCTACCAACACCCGCGGCGCCGGTTCACTGTTTGCACGCAATCTTTGCCTTAGGCTGAGCTGGTGA TCCGACCACCTCGCTGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSIRTRGAALLAALACVSLVVIGSMPKTLADPGQPPPPKPLPNPVAQPDDLPRIAPIGGAQVKTNTPLGLGPGTGRPLAA GRERSNATISPSPTDGTHLPTAIAGKDVVLHLPQERDLTPAQWGDGGSATFTSRDTDYRISPFAGGGVDVNIIRRTIFTP ENFTFGLRVPEGTHVRQGANVVLVESDAAPGLPATTIATLSVPVARDAKGNPVQVTPVIHGDYVYQQSNLALDLGPADIF AFPVTITLSYRASSVPASGQLASDWEGLPEGGGPPEAKKAAQIIGAPGDYVVDPGGAHRPGNVDPVLYAQRHADRCLSGP NEFRSEDGRTADFWSSCQRQAMCLDVTPGQTSVEVCKNQAFANMSAQCTATFGQTGPDYEACLNVANGHAAWSKENLLGG GLCQPVGPGTNTRFLPSNNNRYCS
Sequences:
>Translated_424_residues MSIRTRGAALLAALACVSLVVIGSMPKTLADPGQPPPPKPLPNPVAQPDDLPRIAPIGGAQVKTNTPLGLGPGTGRPLAA GRERSNATISPSPTDGTHLPTAIAGKDVVLHLPQERDLTPAQWGDGGSATFTSRDTDYRISPFAGGGVDVNIIRRTIFTP ENFTFGLRVPEGTHVRQGANVVLVESDAAPGLPATTIATLSVPVARDAKGNPVQVTPVIHGDYVYQQSNLALDLGPADIF AFPVTITLSYRASSVPASGQLASDWEGLPEGGGPPEAKKAAQIIGAPGDYVVDPGGAHRPGNVDPVLYAQRHADRCLSGP NEFRSEDGRTADFWSSCQRQAMCLDVTPGQTSVEVCKNQAFANMSAQCTATFGQTGPDYEACLNVANGHAAWSKENLLGG GLCQPVGPGTNTRFLPSNNNRYCS >Mature_423_residues SIRTRGAALLAALACVSLVVIGSMPKTLADPGQPPPPKPLPNPVAQPDDLPRIAPIGGAQVKTNTPLGLGPGTGRPLAAG RERSNATISPSPTDGTHLPTAIAGKDVVLHLPQERDLTPAQWGDGGSATFTSRDTDYRISPFAGGGVDVNIIRRTIFTPE NFTFGLRVPEGTHVRQGANVVLVESDAAPGLPATTIATLSVPVARDAKGNPVQVTPVIHGDYVYQQSNLALDLGPADIFA FPVTITLSYRASSVPASGQLASDWEGLPEGGGPPEAKKAAQIIGAPGDYVVDPGGAHRPGNVDPVLYAQRHADRCLSGPN EFRSEDGRTADFWSSCQRQAMCLDVTPGQTSVEVCKNQAFANMSAQCTATFGQTGPDYEACLNVANGHAAWSKENLLGGG LCQPVGPGTNTRFLPSNNNRYCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44178; Mature: 44047
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRTRGAALLAALACVSLVVIGSMPKTLADPGQPPPPKPLPNPVAQPDDLPRIAPIGGA CCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QVKTNTPLGLGPGTGRPLAAGRERSNATISPSPTDGTHLPTAIAGKDVVLHLPQERDLTP EEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEECCCCEEEECCCCCCCCC AQWGDGGSATFTSRDTDYRISPFAGGGVDVNIIRRTIFTPENFTFGLRVPEGTHVRQGAN CCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCC VVLVESDAAPGLPATTIATLSVPVARDAKGNPVQVTPVIHGDYVYQQSNLALDLGPADIF EEEEECCCCCCCCCEEEEEEECCEECCCCCCCEEEEEEEECCEEEECCCEEEEECCCCEE AFPVTITLSYRASSVPASGQLASDWEGLPEGGGPPEAKKAAQIIGAPGDYVVDPGGAHRP EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCC GNVDPVLYAQRHADRCLSGPNEFRSEDGRTADFWSSCQRQAMCLDVTPGQTSVEVCKNQA CCCCCEEEEHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHH FANMSAQCTATFGQTGPDYEACLNVANGHAAWSKENLLGGGLCQPVGPGTNTRFLPSNNN HCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC RYCS CCCC >Mature Secondary Structure SIRTRGAALLAALACVSLVVIGSMPKTLADPGQPPPPKPLPNPVAQPDDLPRIAPIGGA CCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QVKTNTPLGLGPGTGRPLAAGRERSNATISPSPTDGTHLPTAIAGKDVVLHLPQERDLTP EEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEECCCCEEEECCCCCCCCC AQWGDGGSATFTSRDTDYRISPFAGGGVDVNIIRRTIFTPENFTFGLRVPEGTHVRQGAN CCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCC VVLVESDAAPGLPATTIATLSVPVARDAKGNPVQVTPVIHGDYVYQQSNLALDLGPADIF EEEEECCCCCCCCCEEEEEEECCEECCCCCCCEEEEEEEECCEEEECCCEEEEECCCCEE AFPVTITLSYRASSVPASGQLASDWEGLPEGGGPPEAKKAAQIIGAPGDYVVDPGGAHRP EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCC GNVDPVLYAQRHADRCLSGPNEFRSEDGRTADFWSSCQRQAMCLDVTPGQTSVEVCKNQA CCCCCEEEEHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHH FANMSAQCTATFGQTGPDYEACLNVANGHAAWSKENLLGGGLCQPVGPGTNTRFLPSNNN HCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC RYCS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA