Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628981
Identifier: 169628981
GI number: 169628981
Start: 1890870
End: 1891514
Strand: Direct
Name: 169628981
Synonym: MAB_1893
Alternate gene names: NA
Gene position: 1890870-1891514 (Clockwise)
Preceding gene: 169628980
Following gene: 169628986
Centisome position: 37.32
GC content: 64.81
Gene sequence:
>645_bases GTGATCCGACCACCTCGCTGGATGTTGGCTGCGGTCTGCGCTGCGACGATGCTGACATCGGGGTGTACTGCCGTCGTCGA CGGTGCCGCGGTCGCCACTCCGGGTGAGGAGGGCAAGTGGCTCACCAACCCGAAGTGCAGCTCGGTGTCGGTGCCGTTGT TGGATGTGCCCTTGGACAACGATTCCGAGCCGCGGGTCGAGGTACCCCAGCCGACCGGATGGGAACGCATCAACCGCTTT GAAAGTGGAGTGGTCCGCGTCTACCTGGCCGCGCCCGACTTGCAGGCTGGCGGGTTCGTACCCAATGCCACCGTGGCCAT CGCGAACCTGTCCGGAAAAGCCGGCACCGAAGAGGCCGCCTTCGCCGCCGAGCGGGGCGGATTGGAGTCCTTCGGCGTCA CCGATCTGGTCGAAGCTCAGGGCGCCATCTGCGGGTACCCGTCAAGGACCATGACCTACAACATGGGACTGGGCAATATC CCGGCCCACCGGGTTACCACCACCATCGTGGCGGTCAAGAACAACACCAAGATGTACACCGTCGGGGTGTCGGTGCAGGC ATTGGACGATACCGTCCGTGGTTTTGACACGGCGCGCGAGACGATTCTGGCGGGGCTGCAAGTCGGCCCGCCCGCTACAG CCTGA
Upstream 100 bases:
>100_bases AACAACAACCGATATTGCAGTTGACCGTTGAGGCAATCGCTACCAACACCCGCGGCGCCGGTTCACTGTTTGCACGCAAT CTTTGCCTTAGGCTGAGCTG
Downstream 100 bases:
>100_bases TATCAGTTGCCGGAGTGGACCATTGGGCATCGATGACGGTGCTGTGCTCCGGTAGCGCTGGTCGGTAGGTGCTGTCTTGG GCCATACGGTCGGCGACACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MIRPPRWMLAAVCAATMLTSGCTAVVDGAAVATPGEEGKWLTNPKCSSVSVPLLDVPLDNDSEPRVEVPQPTGWERINRF ESGVVRVYLAAPDLQAGGFVPNATVAIANLSGKAGTEEAAFAAERGGLESFGVTDLVEAQGAICGYPSRTMTYNMGLGNI PAHRVTTTIVAVKNNTKMYTVGVSVQALDDTVRGFDTARETILAGLQVGPPATA
Sequences:
>Translated_214_residues MIRPPRWMLAAVCAATMLTSGCTAVVDGAAVATPGEEGKWLTNPKCSSVSVPLLDVPLDNDSEPRVEVPQPTGWERINRF ESGVVRVYLAAPDLQAGGFVPNATVAIANLSGKAGTEEAAFAAERGGLESFGVTDLVEAQGAICGYPSRTMTYNMGLGNI PAHRVTTTIVAVKNNTKMYTVGVSVQALDDTVRGFDTARETILAGLQVGPPATA >Mature_214_residues MIRPPRWMLAAVCAATMLTSGCTAVVDGAAVATPGEEGKWLTNPKCSSVSVPLLDVPLDNDSEPRVEVPQPTGWERINRF ESGVVRVYLAAPDLQAGGFVPNATVAIANLSGKAGTEEAAFAAERGGLESFGVTDLVEAQGAICGYPSRTMTYNMGLGNI PAHRVTTTIVAVKNNTKMYTVGVSVQALDDTVRGFDTARETILAGLQVGPPATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22321; Mature: 22321
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPPRWMLAAVCAATMLTSGCTAVVDGAAVATPGEEGKWLTNPKCSSVSVPLLDVPLDN CCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCEECCCCCCCCCCCEEECCCCC DSEPRVEVPQPTGWERINRFESGVVRVYLAAPDLQAGGFVPNATVAIANLSGKAGTEEAA CCCCCEECCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHH FAAERGGLESFGVTDLVEAQGAICGYPSRTMTYNMGLGNIPAHRVTTTIVAVKNNTKMYT HHHHHCCCCCCCCHHHHHHCCCEECCCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEE VGVSVQALDDTVRGFDTARETILAGLQVGPPATA EEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIRPPRWMLAAVCAATMLTSGCTAVVDGAAVATPGEEGKWLTNPKCSSVSVPLLDVPLDN CCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCEECCCCCCCCCCCEEECCCCC DSEPRVEVPQPTGWERINRFESGVVRVYLAAPDLQAGGFVPNATVAIANLSGKAGTEEAA CCCCCEECCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHH FAAERGGLESFGVTDLVEAQGAICGYPSRTMTYNMGLGNIPAHRVTTTIVAVKNNTKMYT HHHHHCCCCCCCCHHHHHHCCCEECCCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEE VGVSVQALDDTVRGFDTARETILAGLQVGPPATA EEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA