Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169628981

Identifier: 169628981

GI number: 169628981

Start: 1890870

End: 1891514

Strand: Direct

Name: 169628981

Synonym: MAB_1893

Alternate gene names: NA

Gene position: 1890870-1891514 (Clockwise)

Preceding gene: 169628980

Following gene: 169628986

Centisome position: 37.32

GC content: 64.81

Gene sequence:

>645_bases
GTGATCCGACCACCTCGCTGGATGTTGGCTGCGGTCTGCGCTGCGACGATGCTGACATCGGGGTGTACTGCCGTCGTCGA
CGGTGCCGCGGTCGCCACTCCGGGTGAGGAGGGCAAGTGGCTCACCAACCCGAAGTGCAGCTCGGTGTCGGTGCCGTTGT
TGGATGTGCCCTTGGACAACGATTCCGAGCCGCGGGTCGAGGTACCCCAGCCGACCGGATGGGAACGCATCAACCGCTTT
GAAAGTGGAGTGGTCCGCGTCTACCTGGCCGCGCCCGACTTGCAGGCTGGCGGGTTCGTACCCAATGCCACCGTGGCCAT
CGCGAACCTGTCCGGAAAAGCCGGCACCGAAGAGGCCGCCTTCGCCGCCGAGCGGGGCGGATTGGAGTCCTTCGGCGTCA
CCGATCTGGTCGAAGCTCAGGGCGCCATCTGCGGGTACCCGTCAAGGACCATGACCTACAACATGGGACTGGGCAATATC
CCGGCCCACCGGGTTACCACCACCATCGTGGCGGTCAAGAACAACACCAAGATGTACACCGTCGGGGTGTCGGTGCAGGC
ATTGGACGATACCGTCCGTGGTTTTGACACGGCGCGCGAGACGATTCTGGCGGGGCTGCAAGTCGGCCCGCCCGCTACAG
CCTGA

Upstream 100 bases:

>100_bases
AACAACAACCGATATTGCAGTTGACCGTTGAGGCAATCGCTACCAACACCCGCGGCGCCGGTTCACTGTTTGCACGCAAT
CTTTGCCTTAGGCTGAGCTG

Downstream 100 bases:

>100_bases
TATCAGTTGCCGGAGTGGACCATTGGGCATCGATGACGGTGCTGTGCTCCGGTAGCGCTGGTCGGTAGGTGCTGTCTTGG
GCCATACGGTCGGCGACACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MIRPPRWMLAAVCAATMLTSGCTAVVDGAAVATPGEEGKWLTNPKCSSVSVPLLDVPLDNDSEPRVEVPQPTGWERINRF
ESGVVRVYLAAPDLQAGGFVPNATVAIANLSGKAGTEEAAFAAERGGLESFGVTDLVEAQGAICGYPSRTMTYNMGLGNI
PAHRVTTTIVAVKNNTKMYTVGVSVQALDDTVRGFDTARETILAGLQVGPPATA

Sequences:

>Translated_214_residues
MIRPPRWMLAAVCAATMLTSGCTAVVDGAAVATPGEEGKWLTNPKCSSVSVPLLDVPLDNDSEPRVEVPQPTGWERINRF
ESGVVRVYLAAPDLQAGGFVPNATVAIANLSGKAGTEEAAFAAERGGLESFGVTDLVEAQGAICGYPSRTMTYNMGLGNI
PAHRVTTTIVAVKNNTKMYTVGVSVQALDDTVRGFDTARETILAGLQVGPPATA
>Mature_214_residues
MIRPPRWMLAAVCAATMLTSGCTAVVDGAAVATPGEEGKWLTNPKCSSVSVPLLDVPLDNDSEPRVEVPQPTGWERINRF
ESGVVRVYLAAPDLQAGGFVPNATVAIANLSGKAGTEEAAFAAERGGLESFGVTDLVEAQGAICGYPSRTMTYNMGLGNI
PAHRVTTTIVAVKNNTKMYTVGVSVQALDDTVRGFDTARETILAGLQVGPPATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22321; Mature: 22321

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRPPRWMLAAVCAATMLTSGCTAVVDGAAVATPGEEGKWLTNPKCSSVSVPLLDVPLDN
CCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCEECCCCCCCCCCCEEECCCCC
DSEPRVEVPQPTGWERINRFESGVVRVYLAAPDLQAGGFVPNATVAIANLSGKAGTEEAA
CCCCCEECCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHH
FAAERGGLESFGVTDLVEAQGAICGYPSRTMTYNMGLGNIPAHRVTTTIVAVKNNTKMYT
HHHHHCCCCCCCCHHHHHHCCCEECCCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEE
VGVSVQALDDTVRGFDTARETILAGLQVGPPATA
EEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIRPPRWMLAAVCAATMLTSGCTAVVDGAAVATPGEEGKWLTNPKCSSVSVPLLDVPLDN
CCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCEECCCCCCCCCCCEEECCCCC
DSEPRVEVPQPTGWERINRFESGVVRVYLAAPDLQAGGFVPNATVAIANLSGKAGTEEAA
CCCCCEECCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHH
FAAERGGLESFGVTDLVEAQGAICGYPSRTMTYNMGLGNIPAHRVTTTIVAVKNNTKMYT
HHHHHCCCCCCCCHHHHHHCCCEECCCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEE
VGVSVQALDDTVRGFDTARETILAGLQVGPPATA
EEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA