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The map label for this gene is frc [H]

Identifier: 169628977

GI number: 169628977

Start: 1886442

End: 1887794

Strand: Direct

Name: frc [H]

Synonym: MAB_1889

Alternate gene names: 169628977

Gene position: 1886442-1887794 (Clockwise)

Preceding gene: 169628976

Following gene: 169628979

Centisome position: 37.23

GC content: 65.04

Gene sequence:

>1353_bases
GTGATGCATTCCGGGGCGGATATCCCGTCGCTATACGAATGGTTGTCGCCAGCTCTCGGTCCGGTTTCTCCCGCGGCGGT
GGCGCCTTGTACGGGGCCGCGGCACTGGTGGGGTGGCCAGCTCGACGTTGAAGGACTTGCGCTGGGCAGCGTGCAGGCCG
CGCTGACGGCTGCGAACATTGCCTGTACCGGTGAACGTCTTAGCACCGATAGTCGGGCCGTGGCTGCTGCGTTCGCATCC
CTGGACCATCTGCGTGTTGACGGGCGCCAGCCGGTCGGGTTCGCCGAGTTGTCCGGTTTCTTTCGCGCCGCTGATGGCTG
GGTTCGACTGCATGCCAACTACCCACACCATGCCCGTGTCCTCGTGGAGACATTTGGGGTGGACTCCAAAGATGCTTTGG
CAGAGCAGATTCTGCGGCTGGGTGCCGACCTGATCGCGGAGCGTATCACCGCCTCCGGTGGGCTCGCTGTGGCTCTCCGG
TCGCCCAATCAGTGGAGAGGCGGCGGCGCTGGGAAGTTCGTCGACACTCAGCCGTGGATTCGGTTCGAGCTCGGTGAGAC
CCTCGGTGCGCCGCTGGCGCCCGGCCGAAGGCTTTCGGGAGTACGGGTTTTGGACCTCACCCGGGTGATCGCCGGACCGG
TCGCGACACGATTCCTGGCACTCCTGGGCGCTGACGTGTTACGCGTAGATCCGCCCTCGAATCCCGAGCTGGTTGACCAG
TATCTCGATACGGGTTTCGGTAAGCGCAGCGCTATTTCTGACTTCGCCGATGCCGCGCAGCGCGATCGTATCGAGGCACT
GCTGGCCGAGGCCGACGTCGTTATATCCGGGTACCGGCCCGCAGCGTTGACGCGATACGGGTTGGACTCTGCGGCGCTGC
GTGAGCGCTTTCCTGCGCTGTCGGTCGTCACCCTGGATGCGTGGGGTGATGGTGGCCCCTGGGGCGATCGGCGGGGATTT
GATTCGTTGGTGCAGTCAGCGATCGGGGTCGGGGAGCTGTATGGGCAAACGGATAGCACCGGAGCCTGGCGTCCCGGAGC
GCTTCCTGTCCAGGCCCTGGATCATGCGACCGGCTACGGCGTGGCGGCGGCCGCGCTTGCGCTGTTGGCCCGTCGATCGC
AAATTGGGGCAGGCTCTGCGCATCTGTGTTTGGCGCGAACCGGGCATCTCCTTCTGGATCTCGCGAGGAGAAACGGAGGG
CGGCAAGAGTTCACCGTTGCCCGGGAGAGTGTCGAATCGTCCTTTGGGACTTTGTCTTTCGCTCAACCCGTGGCGTTCTC
CGGCGGGGTGCGACTGACCTATCGTTTTCCGCCGGGGCCGTACGGGAACGACCCGCTGAGCTGGGCGCCATGA

Upstream 100 bases:

>100_bases
CGCCGAGGCGGCGGTAACCCCGTAGCTGCGCGAGCCCTGCCCTTACCTCGCGTGTCGGTTGCTGAAGGGCCACCAAGATC
ATGACCCATAGCATCGAGGT

Downstream 100 bases:

>100_bases
GCCCGATGGTTCCGGTGCAGCGATTGCCGCTGCGCCCCGTGTCGTGCTCAGTCCAGGCAGGCGAGGGCCTTACGCGCTGC
CTCTAGCTCGGCTTCGAGCG

Product: L-carnitine dehydratase

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MMHSGADIPSLYEWLSPALGPVSPAAVAPCTGPRHWWGGQLDVEGLALGSVQAALTAANIACTGERLSTDSRAVAAAFAS
LDHLRVDGRQPVGFAELSGFFRAADGWVRLHANYPHHARVLVETFGVDSKDALAEQILRLGADLIAERITASGGLAVALR
SPNQWRGGGAGKFVDTQPWIRFELGETLGAPLAPGRRLSGVRVLDLTRVIAGPVATRFLALLGADVLRVDPPSNPELVDQ
YLDTGFGKRSAISDFADAAQRDRIEALLAEADVVISGYRPAALTRYGLDSAALRERFPALSVVTLDAWGDGGPWGDRRGF
DSLVQSAIGVGELYGQTDSTGAWRPGALPVQALDHATGYGVAAAALALLARRSQIGAGSAHLCLARTGHLLLDLARRNGG
RQEFTVARESVESSFGTLSFAQPVAFSGGVRLTYRFPPGPYGNDPLSWAP

Sequences:

>Translated_450_residues
MMHSGADIPSLYEWLSPALGPVSPAAVAPCTGPRHWWGGQLDVEGLALGSVQAALTAANIACTGERLSTDSRAVAAAFAS
LDHLRVDGRQPVGFAELSGFFRAADGWVRLHANYPHHARVLVETFGVDSKDALAEQILRLGADLIAERITASGGLAVALR
SPNQWRGGGAGKFVDTQPWIRFELGETLGAPLAPGRRLSGVRVLDLTRVIAGPVATRFLALLGADVLRVDPPSNPELVDQ
YLDTGFGKRSAISDFADAAQRDRIEALLAEADVVISGYRPAALTRYGLDSAALRERFPALSVVTLDAWGDGGPWGDRRGF
DSLVQSAIGVGELYGQTDSTGAWRPGALPVQALDHATGYGVAAAALALLARRSQIGAGSAHLCLARTGHLLLDLARRNGG
RQEFTVARESVESSFGTLSFAQPVAFSGGVRLTYRFPPGPYGNDPLSWAP
>Mature_450_residues
MMHSGADIPSLYEWLSPALGPVSPAAVAPCTGPRHWWGGQLDVEGLALGSVQAALTAANIACTGERLSTDSRAVAAAFAS
LDHLRVDGRQPVGFAELSGFFRAADGWVRLHANYPHHARVLVETFGVDSKDALAEQILRLGADLIAERITASGGLAVALR
SPNQWRGGGAGKFVDTQPWIRFELGETLGAPLAPGRRLSGVRVLDLTRVIAGPVATRFLALLGADVLRVDPPSNPELVDQ
YLDTGFGKRSAISDFADAAQRDRIEALLAEADVVISGYRPAALTRYGLDSAALRERFPALSVVTLDAWGDGGPWGDRRGF
DSLVQSAIGVGELYGQTDSTGAWRPGALPVQALDHATGYGVAAAALALLARRSQIGAGSAHLCLARTGHLLLDLARRNGG
RQEFTVARESVESSFGTLSFAQPVAFSGGVRLTYRFPPGPYGNDPLSWAP

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=195, Percent_Identity=31.2820512820513, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI300863124, Length=195, Percent_Identity=31.2820512820513, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI300863126, Length=199, Percent_Identity=29.6482412060301, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI87082093, Length=153, Percent_Identity=28.1045751633987, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788717, Length=196, Percent_Identity=27.0408163265306, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648431, Length=197, Percent_Identity=31.4720812182741, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 47499; Mature: 47499

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHSGADIPSLYEWLSPALGPVSPAAVAPCTGPRHWWGGQLDVEGLALGSVQAALTAANI
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECHHHHHHHHHHE
ACTGERLSTDSRAVAAAFASLDHLRVDGRQPVGFAELSGFFRAADGWVRLHANYPHHARV
EECCCCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHH
LVETFGVDSKDALAEQILRLGADLIAERITASGGLAVALRSPNQWRGGGAGKFVDTQPWI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCE
RFELGETLGAPLAPGRRLSGVRVLDLTRVIAGPVATRFLALLGADVLRVDPPSNPELVDQ
EEECCHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH
YLDTGFGKRSAISDFADAAQRDRIEALLAEADVVISGYRPAALTRYGLDSAALRERFPAL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCHHHHHHHCCCE
SVVTLDAWGDGGPWGDRRGFDSLVQSAIGVGELYGQTDSTGAWRPGALPVQALDHATGYG
EEEEEECCCCCCCCCCCCCHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCH
VAAAALALLARRSQIGAGSAHLCLARTGHLLLDLARRNGGRQEFTVARESVESSFGTLSF
HHHHHHHHHHHHHHCCCCCCEEEEHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
AQPVAFSGGVRLTYRFPPGPYGNDPLSWAP
CCCEEECCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MMHSGADIPSLYEWLSPALGPVSPAAVAPCTGPRHWWGGQLDVEGLALGSVQAALTAANI
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECHHHHHHHHHHE
ACTGERLSTDSRAVAAAFASLDHLRVDGRQPVGFAELSGFFRAADGWVRLHANYPHHARV
EECCCCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHH
LVETFGVDSKDALAEQILRLGADLIAERITASGGLAVALRSPNQWRGGGAGKFVDTQPWI
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCE
RFELGETLGAPLAPGRRLSGVRVLDLTRVIAGPVATRFLALLGADVLRVDPPSNPELVDQ
EEECCHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH
YLDTGFGKRSAISDFADAAQRDRIEALLAEADVVISGYRPAALTRYGLDSAALRERFPAL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCHHHHHHHCCCE
SVVTLDAWGDGGPWGDRRGFDSLVQSAIGVGELYGQTDSTGAWRPGALPVQALDHATGYG
EEEEEECCCCCCCCCCCCCHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCH
VAAAALALLARRSQIGAGSAHLCLARTGHLLLDLARRNGGRQEFTVARESVESSFGTLSF
HHHHHHHHHHHHHHCCCCCCEEEEHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
AQPVAFSGGVRLTYRFPPGPYGNDPLSWAP
CCCEEECCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA