Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628976
Identifier: 169628976
GI number: 169628976
Start: 1885923
End: 1886366
Strand: Direct
Name: 169628976
Synonym: MAB_1888
Alternate gene names: NA
Gene position: 1885923-1886366 (Clockwise)
Preceding gene: 169628975
Following gene: 169628977
Centisome position: 37.22
GC content: 63.29
Gene sequence:
>444_bases ATGGGAGTCGAAGTCAAGGTCGAGTTGCGCTGGGCCGATATGGATGCCTATCGGCATGTGAACAACGTGGCCATGTTTCG GCTGATCGAGGAGGCACGCATCCGGTTTCTTGCCGACAAGCTCATGGGCGTGGAATCCGGTCGGATAACCATGTTCGTCG CGCATCAGGAAATCGACTATGTGCAGCCCTTGCTGTACTCGCACGAACCGGCGCGGGTGATCATGCGCGCCACGCGGATC GGCACGGCGGGGTTCGGTATCGGCTACGAGATTATCGGCGCCGACGGAGCCGTTGCGGCGATCGCGGAGACCTCGATGGT GGTCGTCGACGATGATGGTCGCCCCGCCCAGATTCCAGAGCACCTGCGTGCCGTGCTGGATGGTTTGCAGGGAGAGCCAG TTCCCTTCCGCCGCCGCCGCGCCGAGGCGGCGGTAACCCCGTAG
Upstream 100 bases:
>100_bases ACGGCGCACCACATCGACCCTCTGACCGCAGGCAGTTAGCCCAATCACAACTCGTGGTGTCGATTGGCTGCGATTCGATG TATCGGCGAAAGTTAAGGGC
Downstream 100 bases:
>100_bases CTGCGCGAGCCCTGCCCTTACCTCGCGTGTCGGTTGCTGAAGGGCCACCAAGATCATGACCCATAGCATCGAGGTGTGAT GCATTCCGGGGCGGATATCC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MGVEVKVELRWADMDAYRHVNNVAMFRLIEEARIRFLADKLMGVESGRITMFVAHQEIDYVQPLLYSHEPARVIMRATRI GTAGFGIGYEIIGADGAVAAIAETSMVVVDDDGRPAQIPEHLRAVLDGLQGEPVPFRRRRAEAAVTP
Sequences:
>Translated_147_residues MGVEVKVELRWADMDAYRHVNNVAMFRLIEEARIRFLADKLMGVESGRITMFVAHQEIDYVQPLLYSHEPARVIMRATRI GTAGFGIGYEIIGADGAVAAIAETSMVVVDDDGRPAQIPEHLRAVLDGLQGEPVPFRRRRAEAAVTP >Mature_146_residues GVEVKVELRWADMDAYRHVNNVAMFRLIEEARIRFLADKLMGVESGRITMFVAHQEIDYVQPLLYSHEPARVIMRATRIG TAGFGIGYEIIGADGAVAAIAETSMVVVDDDGRPAQIPEHLRAVLDGLQGEPVPFRRRRAEAAVTP
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16316; Mature: 16185
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVEVKVELRWADMDAYRHVNNVAMFRLIEEARIRFLADKLMGVESGRITMFVAHQEIDY CCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH VQPLLYSHEPARVIMRATRIGTAGFGIGYEIIGADGAVAAIAETSMVVVDDDGRPAQIPE HHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCEEEEEECCCCCCCCHH HLRAVLDGLQGEPVPFRRRRAEAAVTP HHHHHHHCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure GVEVKVELRWADMDAYRHVNNVAMFRLIEEARIRFLADKLMGVESGRITMFVAHQEIDY CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH VQPLLYSHEPARVIMRATRIGTAGFGIGYEIIGADGAVAAIAETSMVVVDDDGRPAQIPE HHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCEEEEEECCCCCCCCHH HLRAVLDGLQGEPVPFRRRRAEAAVTP HHHHHHHCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA