Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628917
Identifier: 169628917
GI number: 169628917
Start: 1830904
End: 1831509
Strand: Direct
Name: 169628917
Synonym: MAB_1829
Alternate gene names: NA
Gene position: 1830904-1831509 (Clockwise)
Preceding gene: 169628916
Following gene: 169628918
Centisome position: 36.13
GC content: 61.39
Gene sequence:
>606_bases ATGCGCTGGCCCATGTCGTTGCCCGTAGCCGCCTGCATAGTTGCGTTGACCGCCGCAGGGTGCACCGACACCACCGGGGG CATCGCGAAAACTGATTCACCCGCGAGCAATCAATCAGTCTCAGCCTCGGCTTCGACGCCCGTCACCAATACGTTGCCGG GCCCGCACCCAGCCCCGACGGACAACAACAACGGGACGAGCTTTGATCCCTGCCTTGCGTATTCAGCAGATGAACTGCGG GCATGGGGCGTGAAGCCGGGTTCGGTTGAAGACCTCGCCAACACGCCCTCGCTGCAGCGGGGCTGCGCCTGGTCCGGGGA TGGATGGGACGTACAGCAGACAGTGCTCAACCGCCCCGTTACTGAGTACCTCAACCAGGACCTGTTCCCTGGATCCGAAC AAGTGACCGTTGAAGGGCTCACCGCGGTGCGATGGCGCGATGAAGTTGACCCACAGCGTGTCTGCTATGTAGAGCTCCCC GCGCAAAAAGCTTCCGTGGGAACGATCGTTGGCGTACGCGATCCAAAGGCGCAGAAAGTGATTCCCGACGCCTGCACCAA GGCGATGAGCATCGCAACAGATACAGCCAAGAAGCTGCCCAAGTAG
Upstream 100 bases:
>100_bases AGCAGATTGACCATTTCCTGGCGATGGAGCTGCTGTACAAGAACCAGGACGATTACAACGCTGGCAACTTCGGCGCGTAC CAAGCGAGCGTTGTTTACTG
Downstream 100 bases:
>100_bases GGCCTGAACAGGGGAGACGATTTTCATGGCTGACGATGGATGGCAGAGCCGTTCTCATGCTGACATTGTCGGGAAGCTAG GTGCGCTGAAGGCGGACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MRWPMSLPVAACIVALTAAGCTDTTGGIAKTDSPASNQSVSASASTPVTNTLPGPHPAPTDNNNGTSFDPCLAYSADELR AWGVKPGSVEDLANTPSLQRGCAWSGDGWDVQQTVLNRPVTEYLNQDLFPGSEQVTVEGLTAVRWRDEVDPQRVCYVELP AQKASVGTIVGVRDPKAQKVIPDACTKAMSIATDTAKKLPK
Sequences:
>Translated_201_residues MRWPMSLPVAACIVALTAAGCTDTTGGIAKTDSPASNQSVSASASTPVTNTLPGPHPAPTDNNNGTSFDPCLAYSADELR AWGVKPGSVEDLANTPSLQRGCAWSGDGWDVQQTVLNRPVTEYLNQDLFPGSEQVTVEGLTAVRWRDEVDPQRVCYVELP AQKASVGTIVGVRDPKAQKVIPDACTKAMSIATDTAKKLPK >Mature_201_residues MRWPMSLPVAACIVALTAAGCTDTTGGIAKTDSPASNQSVSASASTPVTNTLPGPHPAPTDNNNGTSFDPCLAYSADELR AWGVKPGSVEDLANTPSLQRGCAWSGDGWDVQQTVLNRPVTEYLNQDLFPGSEQVTVEGLTAVRWRDEVDPQRVCYVELP AQKASVGTIVGVRDPKAQKVIPDACTKAMSIATDTAKKLPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21196; Mature: 21196
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWPMSLPVAACIVALTAAGCTDTTGGIAKTDSPASNQSVSASASTPVTNTLPGPHPAPT CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DNNNGTSFDPCLAYSADELRAWGVKPGSVEDLANTPSLQRGCAWSGDGWDVQQTVLNRPV CCCCCCCCCCHHHCCHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHH TEYLNQDLFPGSEQVTVEGLTAVRWRDEVDPQRVCYVELPAQKASVGTIVGVRDPKAQKV HHHHCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHC IPDACTKAMSIATDTAKKLPK CHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRWPMSLPVAACIVALTAAGCTDTTGGIAKTDSPASNQSVSASASTPVTNTLPGPHPAPT CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DNNNGTSFDPCLAYSADELRAWGVKPGSVEDLANTPSLQRGCAWSGDGWDVQQTVLNRPV CCCCCCCCCCHHHCCHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHH TEYLNQDLFPGSEQVTVEGLTAVRWRDEVDPQRVCYVELPAQKASVGTIVGVRDPKAQKV HHHHCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHC IPDACTKAMSIATDTAKKLPK CHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA