Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628918
Identifier: 169628918
GI number: 169628918
Start: 1831535
End: 1832749
Strand: Direct
Name: 169628918
Synonym: MAB_1830
Alternate gene names: NA
Gene position: 1831535-1832749 (Clockwise)
Preceding gene: 169628917
Following gene: 169628919
Centisome position: 36.15
GC content: 63.46
Gene sequence:
>1215_bases ATGGCTGACGATGGATGGCAGAGCCGTTCTCATGCTGACATTGTCGGGAAGCTAGGTGCGCTGAAGGCGGACAACGCGTT CACCCTGGCCAACACATGGAGCGATGTATACACGAAGCTCTCTGATGCAGCCGTCTCATACGGCAATGCGAAATCCAAAC TGGCAGAGCCTGATTTCTGGACGGGCAAGGGGCCAGAGGCTGCGCTCGATGAGATGACTACCAAGGAACGCGAACTCACT TCGGAGAGTGGGACGTCCGCCAAAGCGGGCAAGATGAGTACAGCCTTGTTCCAGGACGGAGAGGTGCTCTCGCAGTCTTC GCGGGTCGCGCAGGCGTATCCGGTGCCGCCCGATGACACCGATGCTGATTCCAAAAAGAAGCTGCTGGAGGCGGTTAGAG CTGAGGCACAGCGGCTTTACACCTCGCCGTTGGAGGCCGACCGGCCCAAGTTCACGGAAGACTCGAATACCACTGCCAGT GGCCCTATGCCTGCTGGGCCTGGTGGCAATAACGGCGGCGGTGGTGGTTCTGGTTCGGGCGGTTCCGGCAGCGGTACTCA AACCCCGCCGTCATCCTCGGACGGCTTGGCCAGCAAGGACACCAAACCGCAACTGGCCGGTGGTGAGGGTCAGCAGGCTG GCGCAGGTCAAGGACAGGGCGGCCAGGGCAGTGGTTCCGGTGGAGGCACCCCGGGTGGTGGTCAGGGCGCGGGTTCTGGT GGTGCTGGTTCTGGTTTGGGTTCTGGCTCGGGTGGTTCTGGCCTGCCGATCGGTAGCACGACTGCCGCTGGGTTCTCGCC GTCGTCGACGAGTACGGGTGTCGGTGGGTCAGGTTCAGGTGTGGGAGGACCTAGCGGGCTGAGCGCGCTGCGCGGTGGGG CGGGCTTGCCGGGCGGTGCCGCAGCTGGTGCTGGCGGTGGTGGCGTGAATCCCGCTGGTGTGGGTGCTGCCGGTGTACGT GGCATGGGCCCCATGGGAATGATGGGCGGCGCCGGTGGGCACGGTCGTGGGGGCAAGGATGAAGACGATGACGACCATGC GACGCCGCAGATCCTGATCAATTACGACAACACCGACGAGTTCATGGGCGACATGCCAGCAGCTTCACCGGGGGTTATCG GTGACTGGTCCGAGCAGGAGAAAGCCGAAAAGGCCGCGCGGGAACGAGAAGTGCGCCGCTACAAAGCCCTTGGCTGGGAC GTGAAGTTCGAGTGA
Upstream 100 bases:
>100_bases CAGAAAGTGATTCCCGACGCCTGCACCAAGGCGATGAGCATCGCAACAGATACAGCCAAGAAGCTGCCCAAGTAGGGCCT GAACAGGGGAGACGATTTTC
Downstream 100 bases:
>100_bases CCACGGCCGGTGTGCCGGAAAGGGTACGGCGATGAGTGAGACCTTCAATGTGAGGCCCGAAGATCTTCACCGGCACGGTG AGTCGATTCTTGACGCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MADDGWQSRSHADIVGKLGALKADNAFTLANTWSDVYTKLSDAAVSYGNAKSKLAEPDFWTGKGPEAALDEMTTKERELT SESGTSAKAGKMSTALFQDGEVLSQSSRVAQAYPVPPDDTDADSKKKLLEAVRAEAQRLYTSPLEADRPKFTEDSNTTAS GPMPAGPGGNNGGGGGSGSGGSGSGTQTPPSSSDGLASKDTKPQLAGGEGQQAGAGQGQGGQGSGSGGGTPGGGQGAGSG GAGSGLGSGSGGSGLPIGSTTAAGFSPSSTSTGVGGSGSGVGGPSGLSALRGGAGLPGGAAAGAGGGGVNPAGVGAAGVR GMGPMGMMGGAGGHGRGGKDEDDDDHATPQILINYDNTDEFMGDMPAASPGVIGDWSEQEKAEKAAREREVRRYKALGWD VKFE
Sequences:
>Translated_404_residues MADDGWQSRSHADIVGKLGALKADNAFTLANTWSDVYTKLSDAAVSYGNAKSKLAEPDFWTGKGPEAALDEMTTKERELT SESGTSAKAGKMSTALFQDGEVLSQSSRVAQAYPVPPDDTDADSKKKLLEAVRAEAQRLYTSPLEADRPKFTEDSNTTAS GPMPAGPGGNNGGGGGSGSGGSGSGTQTPPSSSDGLASKDTKPQLAGGEGQQAGAGQGQGGQGSGSGGGTPGGGQGAGSG GAGSGLGSGSGGSGLPIGSTTAAGFSPSSTSTGVGGSGSGVGGPSGLSALRGGAGLPGGAAAGAGGGGVNPAGVGAAGVR GMGPMGMMGGAGGHGRGGKDEDDDDHATPQILINYDNTDEFMGDMPAASPGVIGDWSEQEKAEKAAREREVRRYKALGWD VKFE >Mature_403_residues ADDGWQSRSHADIVGKLGALKADNAFTLANTWSDVYTKLSDAAVSYGNAKSKLAEPDFWTGKGPEAALDEMTTKERELTS ESGTSAKAGKMSTALFQDGEVLSQSSRVAQAYPVPPDDTDADSKKKLLEAVRAEAQRLYTSPLEADRPKFTEDSNTTASG PMPAGPGGNNGGGGGSGSGGSGSGTQTPPSSSDGLASKDTKPQLAGGEGQQAGAGQGQGGQGSGSGGGTPGGGQGAGSGG AGSGLGSGSGGSGLPIGSTTAAGFSPSSTSTGVGGSGSGVGGPSGLSALRGGAGLPGGAAAGAGGGGVNPAGVGAAGVRG MGPMGMMGGAGGHGRGGKDEDDDDHATPQILINYDNTDEFMGDMPAASPGVIGDWSEQEKAEKAAREREVRRYKALGWDV KFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39365; Mature: 39234
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDGWQSRSHADIVGKLGALKADNAFTLANTWSDVYTKLSDAAVSYGNAKSKLAEPDFW CCCCCCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC TGKGPEAALDEMTTKERELTSESGTSAKAGKMSTALFQDGEVLSQSSRVAQAYPVPPDDT CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHEECCCCCCCC DADSKKKLLEAVRAEAQRLYTSPLEADRPKFTEDSNTTASGPMPAGPGGNNGGGGGSGSG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGSGTQTPPSSSDGLASKDTKPQLAGGEGQQAGAGQGQGGQGSGSGGGTPGGGQGAGSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GAGSGLGSGSGGSGLPIGSTTAAGFSPSSTSTGVGGSGSGVGGPSGLSALRGGAGLPGGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC AAGAGGGGVNPAGVGAAGVRGMGPMGMMGGAGGHGRGGKDEDDDDHATPQILINYDNTDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHH FMGDMPAASPGVIGDWSEQEKAEKAAREREVRRYKALGWDVKFE HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure ADDGWQSRSHADIVGKLGALKADNAFTLANTWSDVYTKLSDAAVSYGNAKSKLAEPDFW CCCCCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC TGKGPEAALDEMTTKERELTSESGTSAKAGKMSTALFQDGEVLSQSSRVAQAYPVPPDDT CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHEECCCCCCCC DADSKKKLLEAVRAEAQRLYTSPLEADRPKFTEDSNTTASGPMPAGPGGNNGGGGGSGSG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGSGTQTPPSSSDGLASKDTKPQLAGGEGQQAGAGQGQGGQGSGSGGGTPGGGQGAGSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GAGSGLGSGSGGSGLPIGSTTAAGFSPSSTSTGVGGSGSGVGGPSGLSALRGGAGLPGGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC AAGAGGGGVNPAGVGAAGVRGMGPMGMMGGAGGHGRGGKDEDDDDHATPQILINYDNTDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHH FMGDMPAASPGVIGDWSEQEKAEKAAREREVRRYKALGWDVKFE HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA