Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628889
Identifier: 169628889
GI number: 169628889
Start: 1801639
End: 1802724
Strand: Direct
Name: 169628889
Synonym: MAB_1800
Alternate gene names: NA
Gene position: 1801639-1802724 (Clockwise)
Preceding gene: 169628888
Following gene: 169628890
Centisome position: 35.56
GC content: 61.88
Gene sequence:
>1086_bases ATGGCTGAACCGGGCGATACCCCCTACCTTGGGTCGATCCTTGCGCGCCTGCACTTCTGGGGTGTCGTCTCCGATATGGA CGTACCTGGCGGCGTCACAGGCACATTCGAGCTCGCCGACCAAGACGGCGCAGTCACCATGGACGCCCTCGTAGGGCCTC CTGGTCCCGCTGGTGAGAATGCCCCCATCGTCAAGATGCAGTACCAGTCCAGCATCGACGACCCCGCCGATCTTCCCCAA AACCTCACCGACGATCCGATCGATATCGGAAAAGCCTGGTGGGTAGGCAACATCGTCTACCTGTGGGACGGCGAACACTA CGTCCAGAAGCAGATGGGCACACAAGGCCCCCCGGGACCGCTGCCGAACATCACTCCCACGGTCCAACTGCTGGACCCGG ACAACCCCAGTTTGACCTCGGAGATCATCGTTTCGGGTACCTCCGCCAACCCGACATGGCTCCTGAAGCTCAAAGCACCG CGGGGTCCGCAGGGCGATAACGCCACCATCCGAGACGCAACCGACTATGACGACTCGGTCGCGCCCGCCGCGGGACAGGT CATTGCCTGGAACGGTGTCGACTACGCGCCAGCCGACTTCAACCCCTTGGCGACAAGGTTCTACACCGTCCCCGAGTCTG CGTTCACCGACTTCACGGGTCTAGCCACGCGACAGACGATCGGCTCATTCATCATCCCGCCGATGCCGTTCGACTACGTA CCCGTAGTGCACGGGCATTTCAAGGCCAACGGCATCGAACTCGACGCCGACCCATTCATCATCGGCTCCGAGGTCCGCAT AGGGAATGCCACAAGCGGCCAGCTGATCGCCAAGGGCGCCGGCAACATGTCCTCCTGGTCCGCCCTGTTCCCGCACGCCT CATCCACGGGCTCCCCGAACACCGCTATCACCCCCGACAACGGGATAGGCATGATCCCGGCATACAGCACCGGTACAACG TCAACTTTGTACGTGAACCTCGTCAACGAGGGCATGGCGGGCTTCTACTCCTTCAACAAAGCAGGCGCACAGCTCTCAAT CCTCATCGTCCCCGTCTCTCCGTTGAAGCCTGAGGACGGCTCCTAG
Upstream 100 bases:
>100_bases GACCTACCCGAAATGGCCGAACCGGCATGGCGGGTGACTCCGAACATCGCCATCAAGGATGAGCGACCCATCGGGGATGA CTTCGTGAAGGGAATCGAGA
Downstream 100 bases:
>100_bases TGCCACGGTCTTTCGACCGAATCCCGCTGCCGTTCAACGACCCTAACCAGGGGCTCGAGTTCCATATCGGCACCGCTTTC CAGCAAGGGCTGGAAATGTG
Product: bacteriophage minor tail subunit
Products: NA
Alternate protein names: Phage Tail
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MAEPGDTPYLGSILARLHFWGVVSDMDVPGGVTGTFELADQDGAVTMDALVGPPGPAGENAPIVKMQYQSSIDDPADLPQ NLTDDPIDIGKAWWVGNIVYLWDGEHYVQKQMGTQGPPGPLPNITPTVQLLDPDNPSLTSEIIVSGTSANPTWLLKLKAP RGPQGDNATIRDATDYDDSVAPAAGQVIAWNGVDYAPADFNPLATRFYTVPESAFTDFTGLATRQTIGSFIIPPMPFDYV PVVHGHFKANGIELDADPFIIGSEVRIGNATSGQLIAKGAGNMSSWSALFPHASSTGSPNTAITPDNGIGMIPAYSTGTT STLYVNLVNEGMAGFYSFNKAGAQLSILIVPVSPLKPEDGS
Sequences:
>Translated_361_residues MAEPGDTPYLGSILARLHFWGVVSDMDVPGGVTGTFELADQDGAVTMDALVGPPGPAGENAPIVKMQYQSSIDDPADLPQ NLTDDPIDIGKAWWVGNIVYLWDGEHYVQKQMGTQGPPGPLPNITPTVQLLDPDNPSLTSEIIVSGTSANPTWLLKLKAP RGPQGDNATIRDATDYDDSVAPAAGQVIAWNGVDYAPADFNPLATRFYTVPESAFTDFTGLATRQTIGSFIIPPMPFDYV PVVHGHFKANGIELDADPFIIGSEVRIGNATSGQLIAKGAGNMSSWSALFPHASSTGSPNTAITPDNGIGMIPAYSTGTT STLYVNLVNEGMAGFYSFNKAGAQLSILIVPVSPLKPEDGS >Mature_360_residues AEPGDTPYLGSILARLHFWGVVSDMDVPGGVTGTFELADQDGAVTMDALVGPPGPAGENAPIVKMQYQSSIDDPADLPQN LTDDPIDIGKAWWVGNIVYLWDGEHYVQKQMGTQGPPGPLPNITPTVQLLDPDNPSLTSEIIVSGTSANPTWLLKLKAPR GPQGDNATIRDATDYDDSVAPAAGQVIAWNGVDYAPADFNPLATRFYTVPESAFTDFTGLATRQTIGSFIIPPMPFDYVP VVHGHFKANGIELDADPFIIGSEVRIGNATSGQLIAKGAGNMSSWSALFPHASSTGSPNTAITPDNGIGMIPAYSTGTTS TLYVNLVNEGMAGFYSFNKAGAQLSILIVPVSPLKPEDGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38018; Mature: 37887
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPGDTPYLGSILARLHFWGVVSDMDVPGGVTGTFELADQDGAVTMDALVGPPGPAGEN CCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCC APIVKMQYQSSIDDPADLPQNLTDDPIDIGKAWWVGNIVYLWDGEHYVQKQMGTQGPPGP CCEEEEECCCCCCCHHHCCCCCCCCCHHCCCEEEECCEEEEECCCHHHHHHHCCCCCCCC LPNITPTVQLLDPDNPSLTSEIIVSGTSANPTWLLKLKAPRGPQGDNATIRDATDYDDSV CCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCC APAAGQVIAWNGVDYAPADFNPLATRFYTVPESAFTDFTGLATRQTIGSFIIPPMPFDYV CCCCCCEEEECCCCCCCCCCCCHHEEEEECCCHHHCCHHHHHHHHHHCCEECCCCCCCCC PVVHGHFKANGIELDADPFIIGSEVRIGNATSGQLIAKGAGNMSSWSALFPHASSTGSPN CEEECEEECCCEEECCCCEEEECEEEECCCCCCCEEEECCCCCCCCCEECCCCCCCCCCC TAITPDNGIGMIPAYSTGTTSTLYVNLVNEGMAGFYSFNKAGAQLSILIVPVSPLKPEDG CEECCCCCEEEEECCCCCCCEEEEEEEECCCCHHEEEECCCCCEEEEEEEECCCCCCCCC S C >Mature Secondary Structure AEPGDTPYLGSILARLHFWGVVSDMDVPGGVTGTFELADQDGAVTMDALVGPPGPAGEN CCCCCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCC APIVKMQYQSSIDDPADLPQNLTDDPIDIGKAWWVGNIVYLWDGEHYVQKQMGTQGPPGP CCEEEEECCCCCCCHHHCCCCCCCCCHHCCCEEEECCEEEEECCCHHHHHHHCCCCCCCC LPNITPTVQLLDPDNPSLTSEIIVSGTSANPTWLLKLKAPRGPQGDNATIRDATDYDDSV CCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCC APAAGQVIAWNGVDYAPADFNPLATRFYTVPESAFTDFTGLATRQTIGSFIIPPMPFDYV CCCCCCEEEECCCCCCCCCCCCHHEEEEECCCHHHCCHHHHHHHHHHCCEECCCCCCCCC PVVHGHFKANGIELDADPFIIGSEVRIGNATSGQLIAKGAGNMSSWSALFPHASSTGSPN CEEECEEECCCEEECCCCEEEECEEEECCCCCCCEEEECCCCCCCCCEECCCCCCCCCCC TAITPDNGIGMIPAYSTGTTSTLYVNLVNEGMAGFYSFNKAGAQLSILIVPVSPLKPEDG CEECCCCCEEEEECCCCCCCEEEEEEEECCCCHHEEEECCCCCEEEEEEEECCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA