Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628888
Identifier: 169628888
GI number: 169628888
Start: 1801128
End: 1801646
Strand: Direct
Name: 169628888
Synonym: MAB_1799
Alternate gene names: NA
Gene position: 1801128-1801646 (Clockwise)
Preceding gene: 169628887
Following gene: 169628889
Centisome position: 35.55
GC content: 59.15
Gene sequence:
>519_bases TTGGCTGCAGATAAGTACGTTCCGCGTGCCTTACAAGCCTATGCGGAGAAGCAGAAGGCCCAGGACGCGCAGAAAGCGGA GATGGAAAGCGCCTATCAGGACTTTCTGACGGACTGCCACTACCCGCAGGACAAAGACGGAAACCGCATGGACTCGGCGC ATTTCGTGTGGCTTGTGGGTTACCACATGATCAGGTGCGGGTGGCGGCGCTCGGCGCAACCCCTCATCAAACCGCGGGCC GTTGAAGCGCCCGGGGTAGTCGAAGGCGCAATCGAATGGGTTCCTATCGACGCACCCGACGACCCCTTAGAGGGCGTCGA GAACATGACGTTCGCACAGATCAACGCCCTACCGGAGTGGCTGAAACGCAAAGCGATACAGCGACTCAACGGCAACCAAG ACGCAGATGACGACCTACCCGAAATGGCCGAACCGGCATGGCGGGTGACTCCGAACATCGCCATCAAGGATGAGCGACCC ATCGGGGATGACTTCGTGAAGGGAATCGAGAATGGCTGA
Upstream 100 bases:
>100_bases AAGACCCAGTAGCCAAGTCGATGCGCACCCTCGCGGGCTTCTGGAACCTCGCCGGAACCTTCTTCGGTTCCGACTCAATG TTCTGAGTAAAGGAACGAAA
Downstream 100 bases:
>100_bases ACCGGGCGATACCCCCTACCTTGGGTCGATCCTTGCGCGCCTGCACTTCTGGGGTGTCGTCTCCGATATGGACGTACCTG GCGGCGTCACAGGCACATTC
Product: bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MAADKYVPRALQAYAEKQKAQDAQKAEMESAYQDFLTDCHYPQDKDGNRMDSAHFVWLVGYHMIRCGWRRSAQPLIKPRA VEAPGVVEGAIEWVPIDAPDDPLEGVENMTFAQINALPEWLKRKAIQRLNGNQDADDDLPEMAEPAWRVTPNIAIKDERP IGDDFVKGIENG
Sequences:
>Translated_172_residues MAADKYVPRALQAYAEKQKAQDAQKAEMESAYQDFLTDCHYPQDKDGNRMDSAHFVWLVGYHMIRCGWRRSAQPLIKPRA VEAPGVVEGAIEWVPIDAPDDPLEGVENMTFAQINALPEWLKRKAIQRLNGNQDADDDLPEMAEPAWRVTPNIAIKDERP IGDDFVKGIENG >Mature_171_residues AADKYVPRALQAYAEKQKAQDAQKAEMESAYQDFLTDCHYPQDKDGNRMDSAHFVWLVGYHMIRCGWRRSAQPLIKPRAV EAPGVVEGAIEWVPIDAPDDPLEGVENMTFAQINALPEWLKRKAIQRLNGNQDADDDLPEMAEPAWRVTPNIAIKDERPI GDDFVKGIENG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19420; Mature: 19289
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADKYVPRALQAYAEKQKAQDAQKAEMESAYQDFLTDCHYPQDKDGNRMDSAHFVWLVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH YHMIRCGWRRSAQPLIKPRAVEAPGVVEGAIEWVPIDAPDDPLEGVENMTFAQINALPEW HHHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LKRKAIQRLNGNQDADDDLPEMAEPAWRVTPNIAIKDERPIGDDFVKGIENG HHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCEEECCCCCCCHHHHHHCCCC >Mature Secondary Structure AADKYVPRALQAYAEKQKAQDAQKAEMESAYQDFLTDCHYPQDKDGNRMDSAHFVWLVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH YHMIRCGWRRSAQPLIKPRAVEAPGVVEGAIEWVPIDAPDDPLEGVENMTFAQINALPEW HHHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH LKRKAIQRLNGNQDADDDLPEMAEPAWRVTPNIAIKDERPIGDDFVKGIENG HHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCEEECCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA