Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628887
Identifier: 169628887
GI number: 169628887
Start: 1799317
End: 1801113
Strand: Direct
Name: 169628887
Synonym: MAB_1798
Alternate gene names: NA
Gene position: 1799317-1801113 (Clockwise)
Preceding gene: 169628886
Following gene: 169628888
Centisome position: 35.51
GC content: 59.04
Gene sequence:
>1797_bases GTGTCGGGTGATTGGTCGGTCGATCTGACCGACTTCACAAGCCTGCAAGGAATCCTGGACCGGCTGCTCCGCGAGACGCA GACCACCCCAGACCTTGGCGACCCCATGGTGGCGTACCGCTACCTCAATGCGCGCCGCAAGGCCATGCGGGACGCCTACA AGCAGCGACCTTTGCTGAGGATCTGGGACAAGCACCACCGCCCGATCGCCGACCTAGCGGGCGAGAAATCGGTTGTTGTA GAGGAAGTCATGGCGGACTCAGGTACCGCCACGGTGGTCATCAGGCATTCGAACTGGCTGTCAAAGTTCCTTCTCTATGA CCGCCGCGCTGAAGAAGATATCCAGTTCACGCTAGATCCGAACCCTACTGATCGGTCTTGGAAAACCCGTTGGGGCGGAA AGATCGTGAACGTCAACGCAGTGCGCGACAAAGACGGGTTGCACACCGTTGAGCTCGAGATGATGCACAACCGGGAGCAC GCCAAACACATCCTGGGTGGCGCGAATCCTCTGTTACCGCCTGAAATTCAGTTCCCGAAGATGTTCTTCCTTCCCTGGAA CATGCGCACTGCCGGTTCGATCATCATGTTCTTGAACCTGGCTCGCCAGTTCTTTCCGCTATTGAGTATCCCCACGAACA TTTTCAACCCTGGCGCCTGGCTAGGGGTTCGGGACATCATCGGCGGCCTGAACCCGTTGGCGTGGCCTATCCAGGTCCAA TTCGTCAACCCACTGTTCGATCAGTCTCGTACCACGATCCTGTCGTCCCGCTGGCAAGACCTGCACACCGTTTTGGCTGC ACCGATGCAGGACGCCGGCTGCATGCTGCGCGCCTACACCTGGCTGACCGAAGATGACACCTCGCCGCACCCAGAACTGG GGGCACTCGGGGATGCGCTGGCGCGCCCCACCCGCAACTGCGTGGTCTTCGCATTCGAAGACAAGTCCGGGGTTACTGGA CCCACGGGGACCTTAATTGACGGTCCTCTCCGCCTAATCGCTGAGACCGCCGACGATTTGATCACCAACGCCATCGTCCC GCCCGACATGTACGACGAAGACGGCGACGGCAAAACCGATCCACTGATCAGGAAGTGGTTGGGATTCGCCCCCGCTAAGC CCAAGGTTGTTTTCCGCGAGGGTGAATACACCGGGATCATCGACGCTAAACGGTCCATGAAGGGCTCAACAGCGAAGACC GTGATGACGGGCTCCCGGTCACCGGCCTGGCTGAATCAACTCCAAACATTCGGCATCAAGTACGGGCTGTCCCAGCTATC CGCTGTCATTTCATACGGTTTGGGTGCTTACCAGCAGCCGGGAACCCCCGGTTTGGAGGAGCTGTACCAAGGGCAGCTGG ATAACACGCTGTTCGCATGGCAACGATTCACCGATCCGCGCCGCGTACTTCTCATGGGCGATCTGGGGTATCTGGAGCAT TTCGAACAAGGTCAAGGGACCGCCTACACGTCAGCGGGAATCCTGGATCTACGGAACGGGCATTGGAAGACAAGGGCGTT CGTCAGCTTCAAGACAAGCATCCGCAACGGGATGCCTTGGATAGCCGATGAGCATTTCACCCTCGGCGACAGGGTGGCCT TCCAGTTGGGAAGCGTCCTGCACGTCGACCAAGTGTCGGCGATCCGCCGCTCCTACGATGCGGACTCGCCACTACTGGTT GAACTATCGCTCGGCCAGGACTTGGACGAAGAAGACCCAGTAGCCAAGTCGATGCGCACCCTCGCGGGCTTCTGGAACCT CGCCGGAACCTTCTTCGGTTCCGACTCAATGTTCTGA
Upstream 100 bases:
>100_bases CGCCACGCACGCTCGCGGCGGTCAAGGTGCGCCACTCCAACGCTGACGGGCGGGTCACCATGTTTGTTCCCCAACGCTAT TCGAAGGGCTTCGCGTAGCA
Downstream 100 bases:
>100_bases GTAAAGGAACGAAATTGGCTGCAGATAAGTACGTTCCGCGTGCCTTACAAGCCTATGCGGAGAAGCAGAAGGCCCAGGAC GCGCAGAAAGCGGAGATGGA
Product: bacteriophage protein
Products: NA
Alternate protein names: Bacteriophage Protein; Gp36 Protein
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MSGDWSVDLTDFTSLQGILDRLLRETQTTPDLGDPMVAYRYLNARRKAMRDAYKQRPLLRIWDKHHRPIADLAGEKSVVV EEVMADSGTATVVIRHSNWLSKFLLYDRRAEEDIQFTLDPNPTDRSWKTRWGGKIVNVNAVRDKDGLHTVELEMMHNREH AKHILGGANPLLPPEIQFPKMFFLPWNMRTAGSIIMFLNLARQFFPLLSIPTNIFNPGAWLGVRDIIGGLNPLAWPIQVQ FVNPLFDQSRTTILSSRWQDLHTVLAAPMQDAGCMLRAYTWLTEDDTSPHPELGALGDALARPTRNCVVFAFEDKSGVTG PTGTLIDGPLRLIAETADDLITNAIVPPDMYDEDGDGKTDPLIRKWLGFAPAKPKVVFREGEYTGIIDAKRSMKGSTAKT VMTGSRSPAWLNQLQTFGIKYGLSQLSAVISYGLGAYQQPGTPGLEELYQGQLDNTLFAWQRFTDPRRVLLMGDLGYLEH FEQGQGTAYTSAGILDLRNGHWKTRAFVSFKTSIRNGMPWIADEHFTLGDRVAFQLGSVLHVDQVSAIRRSYDADSPLLV ELSLGQDLDEEDPVAKSMRTLAGFWNLAGTFFGSDSMF
Sequences:
>Translated_598_residues MSGDWSVDLTDFTSLQGILDRLLRETQTTPDLGDPMVAYRYLNARRKAMRDAYKQRPLLRIWDKHHRPIADLAGEKSVVV EEVMADSGTATVVIRHSNWLSKFLLYDRRAEEDIQFTLDPNPTDRSWKTRWGGKIVNVNAVRDKDGLHTVELEMMHNREH AKHILGGANPLLPPEIQFPKMFFLPWNMRTAGSIIMFLNLARQFFPLLSIPTNIFNPGAWLGVRDIIGGLNPLAWPIQVQ FVNPLFDQSRTTILSSRWQDLHTVLAAPMQDAGCMLRAYTWLTEDDTSPHPELGALGDALARPTRNCVVFAFEDKSGVTG PTGTLIDGPLRLIAETADDLITNAIVPPDMYDEDGDGKTDPLIRKWLGFAPAKPKVVFREGEYTGIIDAKRSMKGSTAKT VMTGSRSPAWLNQLQTFGIKYGLSQLSAVISYGLGAYQQPGTPGLEELYQGQLDNTLFAWQRFTDPRRVLLMGDLGYLEH FEQGQGTAYTSAGILDLRNGHWKTRAFVSFKTSIRNGMPWIADEHFTLGDRVAFQLGSVLHVDQVSAIRRSYDADSPLLV ELSLGQDLDEEDPVAKSMRTLAGFWNLAGTFFGSDSMF >Mature_597_residues SGDWSVDLTDFTSLQGILDRLLRETQTTPDLGDPMVAYRYLNARRKAMRDAYKQRPLLRIWDKHHRPIADLAGEKSVVVE EVMADSGTATVVIRHSNWLSKFLLYDRRAEEDIQFTLDPNPTDRSWKTRWGGKIVNVNAVRDKDGLHTVELEMMHNREHA KHILGGANPLLPPEIQFPKMFFLPWNMRTAGSIIMFLNLARQFFPLLSIPTNIFNPGAWLGVRDIIGGLNPLAWPIQVQF VNPLFDQSRTTILSSRWQDLHTVLAAPMQDAGCMLRAYTWLTEDDTSPHPELGALGDALARPTRNCVVFAFEDKSGVTGP TGTLIDGPLRLIAETADDLITNAIVPPDMYDEDGDGKTDPLIRKWLGFAPAKPKVVFREGEYTGIIDAKRSMKGSTAKTV MTGSRSPAWLNQLQTFGIKYGLSQLSAVISYGLGAYQQPGTPGLEELYQGQLDNTLFAWQRFTDPRRVLLMGDLGYLEHF EQGQGTAYTSAGILDLRNGHWKTRAFVSFKTSIRNGMPWIADEHFTLGDRVAFQLGSVLHVDQVSAIRRSYDADSPLLVE LSLGQDLDEEDPVAKSMRTLAGFWNLAGTFFGSDSMF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66992; Mature: 66861
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDWSVDLTDFTSLQGILDRLLRETQTTPDLGDPMVAYRYLNARRKAMRDAYKQRPLLR CCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH IWDKHHRPIADLAGEKSVVVEEVMADSGTATVVIRHSNWLSKFLLYDRRAEEDIQFTLDP HHHHCCCCHHHHCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEECC NPTDRSWKTRWGGKIVNVNAVRDKDGLHTVELEMMHNREHAKHILGGANPLLPPEIQFPK CCCCCCCHHCCCCEEEEEEEEECCCCCEEEEEHHHHCHHHHHHHHCCCCCCCCCCCCCCE MFFLPWNMRTAGSIIMFLNLARQFFPLLSIPTNIFNPGAWLGVRDIIGGLNPLAWPIQVQ EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEHHHHHCCCCCCCCEEEEE FVNPLFDQSRTTILSSRWQDLHTVLAAPMQDAGCMLRAYTWLTEDDTSPHPELGALGDAL EECHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHH ARPTRNCVVFAFEDKSGVTGPTGTLIDGPLRLIAETADDLITNAIVPPDMYDEDGDGKTD HCCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PLIRKWLGFAPAKPKVVFREGEYTGIIDAKRSMKGSTAKTVMTGSRSPAWLNQLQTFGIK HHHHHHHCCCCCCCEEEEECCCEEEEEECHHHCCCCCHHEEEECCCCCHHHHHHHHHHHH YGLSQLSAVISYGLGAYQQPGTPGLEELYQGQLDNTLFAWQRFTDPRRVLLMGDLGYLEH HHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCHHHHH FEQGQGTAYTSAGILDLRNGHWKTRAFVSFKTSIRNGMPWIADEHFTLGDRVAFQLGSVL HHCCCCCEEECCCEEECCCCCEEEEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHCCCH HVDQVSAIRRSYDADSPLLVELSLGQDLDEEDPVAKSMRTLAGFWNLAGTFFGSDSMF HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SGDWSVDLTDFTSLQGILDRLLRETQTTPDLGDPMVAYRYLNARRKAMRDAYKQRPLLR CCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH IWDKHHRPIADLAGEKSVVVEEVMADSGTATVVIRHSNWLSKFLLYDRRAEEDIQFTLDP HHHHCCCCHHHHCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEECC NPTDRSWKTRWGGKIVNVNAVRDKDGLHTVELEMMHNREHAKHILGGANPLLPPEIQFPK CCCCCCCHHCCCCEEEEEEEEECCCCCEEEEEHHHHCHHHHHHHHCCCCCCCCCCCCCCE MFFLPWNMRTAGSIIMFLNLARQFFPLLSIPTNIFNPGAWLGVRDIIGGLNPLAWPIQVQ EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEHHHHHCCCCCCCCEEEEE FVNPLFDQSRTTILSSRWQDLHTVLAAPMQDAGCMLRAYTWLTEDDTSPHPELGALGDAL EECHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHH ARPTRNCVVFAFEDKSGVTGPTGTLIDGPLRLIAETADDLITNAIVPPDMYDEDGDGKTD HCCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PLIRKWLGFAPAKPKVVFREGEYTGIIDAKRSMKGSTAKTVMTGSRSPAWLNQLQTFGIK HHHHHHHCCCCCCCEEEEECCCEEEEEECHHHCCCCCHHEEEECCCCCHHHHHHHHHHHH YGLSQLSAVISYGLGAYQQPGTPGLEELYQGQLDNTLFAWQRFTDPRRVLLMGDLGYLEH HHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCHHHHH FEQGQGTAYTSAGILDLRNGHWKTRAFVSFKTSIRNGMPWIADEHFTLGDRVAFQLGSVL HHCCCCCEEECCCEEECCCCCEEEEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHCCCH HVDQVSAIRRSYDADSPLLVELSLGQDLDEEDPVAKSMRTLAGFWNLAGTFFGSDSMF HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA