Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628877
Identifier: 169628877
GI number: 169628877
Start: 1790357
End: 1791187
Strand: Direct
Name: 169628877
Synonym: MAB_1788
Alternate gene names: NA
Gene position: 1790357-1791187 (Clockwise)
Preceding gene: 169628876
Following gene: 169628878
Centisome position: 35.33
GC content: 61.37
Gene sequence:
>831_bases ATGGCTGTTACCCATTTCATCCCCGAAATCTGGTCGTCCTACATTCTTGAGCGCTACATGGCCAAGAATGTGTTCGCCTC CCTCGTTGACCGCAAGTACGAAGGTGAAGCCCGCAAGGGCAACACCATCCACATCCCCGGTGTGGTCGCCCCGGCGGTCA AGGACTACAAGGCGGCTAGCCGCACCACGTCGGCAGACGCCATCAGCGACACCGGAATCGACATCCTGATCGATCAGGAG AAGAACTTCGACTTCTACGTCGACGACATCGACAACGCGCAGTCGAACGAAAACCTGCTGCCGCTGTACACCGACGCCGC CGGTGACTCGCTGGCCACCGACGCCGACCAGTTCATCGCCAACCTGCTTGTCGCCAACGCCACCGGCATGCCATGGTCGT CCAACCCCACCACGGGAGATGGCGCGTTCAACGTCGTCAAGGACGCCCGCAAGCTGATGAACAAGGCCAACGTTCCTGAC GACGATCTGCGTGTCGCGGTTGTGAACGCCGAGTTCGAAGCCTTGCTGGTCGGTGCTGATTCGAAGCTCACCAGCTTCGA TTCGTCCGGCGACACCGCTGGTCTGCGCAACGCCACTGTTGGAAAGCTGCTCGGATTCCGTGTGGTTACCTCGAACAACC TGCCTGAGTCTGACTCGCCGCAGGCCGTGTTCTTCCACCAGCGTGCCGCAGCGTTCGTGTCTCAGATTGACGAGGTCGAA GGCATGCGCGCACAGGACAAGTTCGCCGACCGCATCCGCGGCCTGCATGTGTACGGCGGCAAGGTCGTTCAGGCCCCCGG CGTGCTCGTCTTCAACCGGGCCGGCAGCTAG
Upstream 100 bases:
>100_bases TGACCTCAAAAACATGTCCCCCAAGGCGATTCGAGAAGCCCGCGAGAGCGGGCAGCTCGACGAGCTGATGGGGAAGTAAG CATAGGAAGGAGCCAGTCAG
Downstream 100 bases:
>100_bases TGCTGGCATCTCCCGCTGACGTCGCCCACGCCCTAGGGCTGGAAGACGAGAACGAGCTCACCGCCTCCCAGCAGGCCCGT GTCGAGGGCCTGCTGGAGAG
Product: bacteriophage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MAVTHFIPEIWSSYILERYMAKNVFASLVDRKYEGEARKGNTIHIPGVVAPAVKDYKAASRTTSADAISDTGIDILIDQE KNFDFYVDDIDNAQSNENLLPLYTDAAGDSLATDADQFIANLLVANATGMPWSSNPTTGDGAFNVVKDARKLMNKANVPD DDLRVAVVNAEFEALLVGADSKLTSFDSSGDTAGLRNATVGKLLGFRVVTSNNLPESDSPQAVFFHQRAAAFVSQIDEVE GMRAQDKFADRIRGLHVYGGKVVQAPGVLVFNRAGS
Sequences:
>Translated_276_residues MAVTHFIPEIWSSYILERYMAKNVFASLVDRKYEGEARKGNTIHIPGVVAPAVKDYKAASRTTSADAISDTGIDILIDQE KNFDFYVDDIDNAQSNENLLPLYTDAAGDSLATDADQFIANLLVANATGMPWSSNPTTGDGAFNVVKDARKLMNKANVPD DDLRVAVVNAEFEALLVGADSKLTSFDSSGDTAGLRNATVGKLLGFRVVTSNNLPESDSPQAVFFHQRAAAFVSQIDEVE GMRAQDKFADRIRGLHVYGGKVVQAPGVLVFNRAGS >Mature_275_residues AVTHFIPEIWSSYILERYMAKNVFASLVDRKYEGEARKGNTIHIPGVVAPAVKDYKAASRTTSADAISDTGIDILIDQEK NFDFYVDDIDNAQSNENLLPLYTDAAGDSLATDADQFIANLLVANATGMPWSSNPTTGDGAFNVVKDARKLMNKANVPDD DLRVAVVNAEFEALLVGADSKLTSFDSSGDTAGLRNATVGKLLGFRVVTSNNLPESDSPQAVFFHQRAAAFVSQIDEVEG MRAQDKFADRIRGLHVYGGKVVQAPGVLVFNRAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29797; Mature: 29665
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTHFIPEIWSSYILERYMAKNVFASLVDRKYEGEARKGNTIHIPGVVAPAVKDYKAAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHC RTTSADAISDTGIDILIDQEKNFDFYVDDIDNAQSNENLLPLYTDAAGDSLATDADQFIA CCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCCCCCHHCCHHHHHH NLLVANATGMPWSSNPTTGDGAFNVVKDARKLMNKANVPDDDLRVAVVNAEFEALLVGAD HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECC SKLTSFDSSGDTAGLRNATVGKLLGFRVVTSNNLPESDSPQAVFFHQRAAAFVSQIDEVE CCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHC GMRAQDKFADRIRGLHVYGGKVVQAPGVLVFNRAGS CCCHHHHHHHHHCCEEEECCEEEECCCEEEEECCCC >Mature Secondary Structure AVTHFIPEIWSSYILERYMAKNVFASLVDRKYEGEARKGNTIHIPGVVAPAVKDYKAAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHC RTTSADAISDTGIDILIDQEKNFDFYVDDIDNAQSNENLLPLYTDAAGDSLATDADQFIA CCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCCCCCHHCCHHHHHH NLLVANATGMPWSSNPTTGDGAFNVVKDARKLMNKANVPDDDLRVAVVNAEFEALLVGAD HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECC SKLTSFDSSGDTAGLRNATVGKLLGFRVVTSNNLPESDSPQAVFFHQRAAAFVSQIDEVE CCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHC GMRAQDKFADRIRGLHVYGGKVVQAPGVLVFNRAGS CCCHHHHHHHHHCCEEEECCEEEECCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA