Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628878
Identifier: 169628878
GI number: 169628878
Start: 1791187
End: 1791759
Strand: Direct
Name: 169628878
Synonym: MAB_1789
Alternate gene names: NA
Gene position: 1791187-1791759 (Clockwise)
Preceding gene: 169628877
Following gene: 169628879
Centisome position: 35.35
GC content: 64.22
Gene sequence:
>573_bases GTGCTGGCATCTCCCGCTGACGTCGCCCACGCCCTAGGGCTGGAAGACGAGAACGAGCTCACCGCCTCCCAGCAGGCCCG TGTCGAGGGCCTGCTGGAGAGGGTGTCTCGAAGGTTTCAGCGGGAGGCCGGACGAACCCTGACCGCAGGGGCGGTGACCG TGCGTGCACTCACGGTGGAGGGCCGGGTACATCTACCGGACCCCCCGTCTGGAGACACTGTTACGGTCACCGACCTCTGT GGTAACACGCTCGAAGGTGTCATCGAGGGCGACTACGTTGATGTCACCCGCAACGGGTGCCCTGTCGCCACGGGTGAAAT CCTTGTCGTCGAATACACCCGAGATGAGCCGCCCCAGGCCGCAATAGATGCGGTAGCGGCGATGGTCGCGCGCCACCTCA CGGTGGAACCCGGTTCACCCGAATCGAAGTCCACCGACCTCACCGCGGGCGCGGATTTTCGGCAGCGTCTTGCCGACTGG GTGTCTGACACATCCTTGTTCACCGACGAGGAACTAGCGGAGGCGAGAAGCTACCGCTACCCCGTCCCTAATGTGATCAT CCACCGCCTGTGA
Upstream 100 bases:
>100_bases CACAGGACAAGTTCGCCGACCGCATCCGCGGCCTGCATGTGTACGGCGGCAAGGTCGTTCAGGCCCCCGGCGTGCTCGTC TTCAACCGGGCCGGCAGCTA
Downstream 100 bases:
>100_bases CCTTCGAATCACTGGCCAGGATCCCGGTCACGTACACCCCATACACGGGTGTCACTCAGGATTCCCTAGGGAACGATGTT CCCTCATTCGGCCCCACAGT
Product: bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MLASPADVAHALGLEDENELTASQQARVEGLLERVSRRFQREAGRTLTAGAVTVRALTVEGRVHLPDPPSGDTVTVTDLC GNTLEGVIEGDYVDVTRNGCPVATGEILVVEYTRDEPPQAAIDAVAAMVARHLTVEPGSPESKSTDLTAGADFRQRLADW VSDTSLFTDEELAEARSYRYPVPNVIIHRL
Sequences:
>Translated_190_residues MLASPADVAHALGLEDENELTASQQARVEGLLERVSRRFQREAGRTLTAGAVTVRALTVEGRVHLPDPPSGDTVTVTDLC GNTLEGVIEGDYVDVTRNGCPVATGEILVVEYTRDEPPQAAIDAVAAMVARHLTVEPGSPESKSTDLTAGADFRQRLADW VSDTSLFTDEELAEARSYRYPVPNVIIHRL >Mature_190_residues MLASPADVAHALGLEDENELTASQQARVEGLLERVSRRFQREAGRTLTAGAVTVRALTVEGRVHLPDPPSGDTVTVTDLC GNTLEGVIEGDYVDVTRNGCPVATGEILVVEYTRDEPPQAAIDAVAAMVARHLTVEPGSPESKSTDLTAGADFRQRLADW VSDTSLFTDEELAEARSYRYPVPNVIIHRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20494; Mature: 20494
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASPADVAHALGLEDENELTASQQARVEGLLERVSRRFQREAGRTLTAGAVTVRALTVE CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEEEEEC GRVHLPDPPSGDTVTVTDLCGNTLEGVIEGDYVDVTRNGCPVATGEILVVEYTRDEPPQA CEEECCCCCCCCEEEEHHHCCCHHHHEECCCEEEEECCCCCEECCCEEEEEECCCCCHHH AIDAVAAMVARHLTVEPGSPESKSTDLTAGADFRQRLADWVSDTSLFTDEELAEARSYRY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC PVPNVIIHRL CCCHHHEECC >Mature Secondary Structure MLASPADVAHALGLEDENELTASQQARVEGLLERVSRRFQREAGRTLTAGAVTVRALTVE CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEEEEEC GRVHLPDPPSGDTVTVTDLCGNTLEGVIEGDYVDVTRNGCPVATGEILVVEYTRDEPPQA CEEECCCCCCCCEEEEHHHCCCHHHHEECCCEEEEECCCCCEECCCEEEEEECCCCCHHH AIDAVAAMVARHLTVEPGSPESKSTDLTAGADFRQRLADWVSDTSLFTDEELAEARSYRY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC PVPNVIIHRL CCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA